Sequence detailsbmy_06281 (Coding sequence)

Part of scaffold_242 (SequenceType object (1))

For more information consult the page for scaffold_242 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TMC7ENSBTAG00000016505 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000021939, Cow)

Protein Percentage 90.14%
cDNA percentage 90.25%
Ka/Ks Ratio 0.25661 (Ka = 0.0612, Ks = 0.2385)

TMC7 (Minke Whale)

Gene Details

transmembrane channel-like 7

External Links

Gene match (Identifier: BACU012916, Minke Whale)

Protein Percentage 93.8%
cDNA percentage 95.49%
Ka/Ks Ratio 0.58101 (Ka = 0.0397, Ks = 0.0683)

Additional orthologs identified in other species via the OPTIC pipeline.

TMC7 (Human)   Tmc7 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1950 bp    Location:577087..536622   Strand:-
Raw sequence 
>bmy_06281
ATGGAGAACTTCCCAAGGATGTCTGAAAAGGAAAAAGCGTTCCTCTTCAGTGATGGCCATTTTGAAAAGAGCCTCTCTTTGGACTCCAGTTGCTTTTCTTCTCCATCTGTGAATTTTCTTCAAGAATTGCCAAGCTACCGGTCTATTGCTCGTAAGAGGACGACCATCCTTTCCCGGGACAAGCAAAGTGGCACTTTGCTGAAGCCAACAGACTCTTACAGCTCCCAGTTGGAGGGAGAAATCACTGAAAGCCTTGACAACCAATCCATTCGGAAATATGCACTGAACATCTCTGAGAAGCGGAGACTAAGGGACATTCAGGAGACCCAAATGAAGTACTTATCTGAGTGGGACCAGTGGAAACGGTATAGCAGCAAGTCTTGGGAGAGGTTCATAGAGAAGGCTCGCGAGATGACAACCCACCTGGAGCTGGAAATTCGGCACTGGAATTCGGTCCTACTTCTCCTTCTTACGGTTTCTGGTATTGCTGAATTTGGTGATATTTCTGATCATCTTTATGCTGTCTTGCTCACCAGATACAAGATCACCAACAGCAGCTTTGTGCTCATTCCATCCAAAGGCGCAGATATTCAATGCACAGTGTATCCATTAAGTAGTTCTGGACTCATTTACTTTTACAGTTATATCATAGACTTGCTTTCTGGCACTAACTTCATCTATGATCTGCCTCTGGCTTATGYGTTAAGCACAGTTGCCTACCTGGCCCTGAGCCTTCTTTGGATAGTGAAAAGGTCGGTGGAAGGGTTCAAAAGTAATCTGATCCGGAGCGAGGAGCACTTCCAGAGTTACTGCAACAAGATCTTTGCGGGCTGGGACTTCTGCATCACCAACCGTAGCATGGCGGACCTGAGGCACAGCAGCCTGCGCTACGAGCTCCGAGCAGATCTGGAGGAAGAAAGAATACGGCAGAAAATAGCAGAAAGGACCTCAGAAGAGACGATACGGATTTACTCTTTGAGACTGTTTTTGAACTGTATCGTGCTGGCCGTTTTAGCGGCATGCTTTTATGCAATCTATAGAGCGACTATATTCTCTCAAGAACACATGAAAAAAGAAATTGACAAGATGGTTTTTGGAGAGAACCTCTTGATATTGTGTGTCTTTATGCGGCTGGCCACCATCTGTGTGTTGGTGTTCACTCTGGGCTCCAAGATTACATCCTGCGATAACTACTCGTGTGAGCTCTGCGGCTACAACCAGAAACTCTACCCGTGCTGGGAGACCCAAGTTGGGCAGGAAATGTACAAGCTGATGATCTTTGACCTCATCATCATCTTGGCTGTGACACTCTTTGTGGATTTTCCTAGAAAGATCCTGGTGACCTACTGTTCCTCTTGGAAGCTGTTTCGGTGCTGGGGACAGCAGGAGTTTGCTATCCCTGATAATGTTCTAGGGATCGTTTATGGGCAAACCATTTGCTGGATCGGAGCCTTCTTCTCACCCCTTCTTCCTGCAGTTGCAACGTTGAAGTTCATTATCATCTTTTACATAAGTCTTCTTTACACCTGCAGACCCTCTCCGAGGCAGTTCAGAGCATCTAATTCTAATTTCTTCTTCCTGTTGGTGTTGCTGATTGGGCTGTGCTTGGCAAYAATACCTCTGACAATCAGCATGACACGCATCCCTTCCTCCAAAGCCTGTGGGCCCTTCACCAACTTCAACACCACCTGGGAGGTGGTCCCCAAGATGGTGAGCACCTTCCCCAGCTCGCTGCAGTCTCTGGTCCATGGCATCACGTCGGAAGCCTTCGCAGTGCCTTTCTTCATGATCATCTGTCTCGTTATGTTCTACTTCATCGCCCTAGCAGGAGCGCACAAGCGGGTGGTCGTCCAGCTCCGAGAGCAGCTGTCCCTGGAAAGTCGTGACAAGCGTTACCTAATCCAGAAACTAACAGAAGCCCAGAGGGATATGAGGAACCGGCTAGACTGA

Related Sequences

bmy_06281T0 SequenceType object (3)

Length: 650 aa      View alignments
>bmy_06281T0
MENFPRMSEKEKAFLFSDGHFEKSLSLDSSCFSSPSVNFLQELPSYRSIARKRTTILSRDKQSGTLLKPTDSYSSQLEGEITESLDNQSIRKYALNISEKRRLRDIQETQMKYLSEWDQWKRYSSKSWERFIEKAREMTTHLELEIRHWNSVLLLLLTVSGIAEFGDISDHLYAVLLTRYKITNSSFVLIPSKGADIQCTVYPLSSSGLIYFYSYIIDLLSGTNFIYDLPLAYXLSTVAYLALSLLWIVKRSVEGFKSNLIRSEEHFQSYCNKIFAGWDFCITNRSMADLRHSSLRYELRADLEEERIRQKIAERTSEETIRIYSLRLFLNCIVLAVLAACFYAIYRATIFSQEHMKKEIDKMVFGENLLILCVFMRLATICVLVFTLGSKITSCDNYSCELCGYNQKLYPCWETQVGQEMYKLMIFDLIIILAVTLFVDFPRKILVTYCSSWKLFRCWGQQEFAIPDNVLGIVYGQTICWIGAFFSPLLPAVATLKFIIIFYISLLYTCRPSPRQFRASNSNFFFLLVLLIGLCLAXIPLTISMTRIPSSKACGPFTNFNTTWEVVPKMVSTFPSSLQSLVHGITSEAFAVPFFMIICLVMFYFIALAGAHKRVVVQLREQLSLESRDKRYLIQKLTEAQRDMRNRLD*