Part of scaffold_242 (Scaffold)

For more information consult the page for scaffold_242 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

GDE1 ENSTTRG00000002454 (Bottlenosed dolphin)

Gene Details

glycerophosphodiester phosphodiesterase 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000002299, Bottlenosed dolphin)

Protein Percentage 95.33%
cDNA percentage 97.67%
Ka/Ks Ratio 0.74376 (Ka = 0.0221, Ks = 0.0297)

GDE1 ENSBTAG00000002101 (Cow)

Gene Details

Glycerophosphodiester phosphodiesterase 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000002710, Cow)

Protein Percentage 93.0%
cDNA percentage 93.44%
Ka/Ks Ratio 0.20929 (Ka = 0.0353, Ks = 0.1688)

GDE1  (Minke Whale)

Gene Details

glycerophosphodiester phosphodiesterase 1

External Links

Gene match (Identifier: BACU012914, Minke Whale)

Protein Percentage 98.67%
cDNA percentage 99.0%
Ka/Ks Ratio 0.20057 (Ka = 0.0056, Ks = 0.0281)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 903 bp    Location:705235..680455   Strand:-
>bmy_06284
ATGTGGCTATGGGAGGAACAGGGGGGCCTCATGGGCCCCTTCTCCTTCCTGATGCTGCTGCTGCTGCTGGTGACGCGCAGTCCCTTCAATGCCTGCCTCTTCACCGGCAGCCTCTACCTCCTGCTGCGCCTCTTCAGCTTTGAGCCGGTGCCCTCCCTCAGGACCATGCAGGTGCTCAGGCCCCGGGACCGCGTCTCCGCCATCGCCCACCGCGGCGGCAGCCACGACGCGCCCGAGAACACGCTGGCTGCCATTCGGCAGGCAGCTAAGAATGGAGCAACAGGCGTGGAGTTGGACCTTGAGTTTACTTCTGATGGGATTCCTGTCTTAATGCACGATAGCACAGTAGATAGGACAACTGATGGCACTGGTCGATTATGTGATTTGACATTTGAAGAAATTAGGAAGCTTAATCCTGCAGCAAATCACAGATTAAGGAATGATTTCCCTGATGAAAAGATTCCTACCCTGAGAGAAGCTGTTGCAGAGTGCCTAAACCATAACCTCACAATCTTCTTTGATGTCAAAGGCCATTCAAATATGATGAGACAAGCAGATCAGAATGTAGTAACAGCTTTAATTCACAGACCTTGGAGCCTTAGCCATACAGGAGATGGGAAACCACGCTTTGATACTTTCTGGAAACAGTCCATGTTTGTGGCATTGGACATTTTGCTCGATTGGAGTATGCATAATATCTTGTGGTACTTGTGTGGAATTTCAGCTTTCCTCATACAAAAGGATTTTGTATCTCCGGACTACTTGAAGAAGTGGTCAGCTAAAGGCATTCAGGTTGTTGCTTGGACTGTTAATACTTTTGATGAAAAAAGTTACTATGAATCCCATCTTGGTTCCAGCTATATCACCGACAGCATGTTGGAAGACTGCACACCTCAGTTCTAG

Related Sequences

bmy_06284T0 Protein

Length: 301 aa      View alignments
>bmy_06284T0
MWLWEEQGGLMGPFSFLMLLLLLVTRSPFNACLFTGSLYLLLRLFSFEPVPSLRTMQVLRPRDRVSAIAHRGGSHDAPENTLAAIRQAAKNGATGVELDLEFTSDGIPVLMHDSTVDRTTDGTGRLCDLTFEEIRKLNPAANHRLRNDFPDEKIPTLREAVAECLNHNLTIFFDVKGHSNMMRQADQNVVTALIHRPWSLSHTGDGKPRFDTFWKQSMFVALDILLDWSMHNILWYLCGISAFLIQKDFVSPDYLKKWSAKGIQVVAWTVNTFDEKSYYESHLGSSYITDSMLEDCTPQF*