Sequence detailsbmy_06292 (Coding sequence)

Part of scaffold_242 (SequenceType object (1))

For more information consult the page for scaffold_242 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

UMODENSTTRG00000001416 (Bottlenosed dolphin)

Gene Details

uromodulin

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000001333, Bottlenosed dolphin)

Protein Percentage 86.71%
cDNA percentage 90.35%
Ka/Ks Ratio 0.37126 (Ka = 0.0634, Ks = 0.1707)

BT.65955ENSBTAG00000006264 (Cow)

Gene Details

uromodulin precursor

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000043345, Cow)

Protein Percentage 80.44%
cDNA percentage 84.98%
Ka/Ks Ratio 0.29409 (Ka = 0.1218, Ks = 0.4141)

UMOD (Minke Whale)

Gene Details

uromodulin

External Links

Gene match (Identifier: BACU012910, Minke Whale)

Protein Percentage 86.69%
cDNA percentage 90.35%
Ka/Ks Ratio 0.38382 (Ka = 0.0841, Ks = 0.2191)

Additional orthologs identified in other species via the OPTIC pipeline.

UMOD (Human)   Umod (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1767 bp    Location:1416519..1401351   Strand:-
Raw sequence 
>bmy_06292
ATGAAGTGGTTCTTCTCTTCGACCTTAATGTGGATGGCAGTGGTGGTGACCTCTTGGGTCATCATAGCTGCAGCCTCTGACACCTCGGCAGCGAGAAGCTGCTCTGAATGTCACAGCAATGCCACCTGCACGGAGGATGGGGCTGCCACTACGTGCTCCTGCCAGACGGGCTTCACTGGCGACGGCCTCGAGTGCGAGGACCTGGACGAATGCGCCACTCCTGGGACACACAACTGCTCCGCCCCCAGCAGCTGCGTGAACACGCCAGGTTCCTACACGTGCGTCTGCCCGGAAGGCTTCCGCCTGAGCTCCGAGCTCGGCTGCACGGACGTGGACGAGTGTGCAGAGCCAGGGCTCAGCCACTGCCACGCCCTGGCCACCTGCGTCAACAGCGAGGGCAACTACTCGTGCGTGTGCCCCGCGGGCTACTGGGGGGACGGGAGGCACTGTGAGTGCTCCCCGGGCTCCTGCGGGCCTGGCCTGGACTGCGTGCACRAGGGCGACACGCTCGTGTGCGCCGACCCGTGCCAGGTCCACCGCATCCTGGACGAGTACTGGCGCAGCGCCCAGTACGGCGCGGGCTACGCCTGCGACTCCGACGTGGCCGGCTGGTACCGCTTCGTGGGCCTGGGCGGCGTGCGCCTGGCCGAGACCTGTGTGCCCGTCCTGCGCTGCAACACGGCCGCGCCCATGTGGCTCAATGGCACGCACCCGTCGAGCGGCGAGGGCATCGTGAGCCGCAGGGCCTGCGCGCACTGGAGCGGCCACTGCTGCCTGTGGGACACGCCCGTCCAGGTGAAGGCCTGCGCCGGCGGCTACTATGTCTACAACCTGACGGCGCCCCCCGAGTGCCATCTGGCTTACTGCACAGACCCCGGTTCCGTGGAGGGGACGTGTGAGGAGTGCAGTGTAGACGAGGACTGCAAATCGGATAATGGCAGATGGCACTGCCAGTGCAAACAGGACTTGAGCATCACCGATCTCTCCCTCCTGGAGCGCAGGCTGGAATGTGGGGTCAGTGACATTAAGCTGTCCCTGGGCAAGTGCCAGCTCAAGAGCCTGGGCTTTGAGAAGGTCTTCATGTACCTGCGGGACAGCCAGTGCTCGGGCTTCACTGAGAGGGGCGACCGGGACTGGATGTCYGTGGTGACCCCAGCCAGGGATGGGCCCTGTGGGACGGTGATGACGAGGAATGAAACTCATGCCACATACAGCAACACTCTCTACCTGGCAGATGAGCTCATCATCCGTGACCGCAACATCAAAATCAACTTTGCGTGCTCCTATCCCCTGGACATGAAAGTCAGCCTGAAGACCTCCCTGCAGCCAATGCGCCCTAAACATCAGCATGGGTGGGACCGGAACGTTCACCGTGTGGATGGCGCTCTTCCAGAGCCCTACCTACATACAGCCCTACCAAGGCTCCTCCGTGACCCTGTCCACCGAGGCCTTTCTCTATGTGGGCACCATGCTGGATGGGGGCGACTTGTCCCGATATTCCGTTTTGCTGGAAACTATGACCTGGTCTACCTGCACTGTGAAGTGTATCTCTGCGACACCGTGAATGAAAAGTGCAAACCTACCTGCTCCGAGACCAGATTCCGCAGTGGGGGCATCATAGACCAAACCCATGTCCTAAACTTGGGTCCCATCACACGGAAAGGGAGCCAGGCCGCAGTCTCGAGGGCTGCTTCCAGTAGCTTGGGGCTCCTGAAGGTCTGGCTGCCTCTGCTTCTGTCGGCCACCTTGACCCTGATGTCTCAGTGA

Related Sequences

bmy_06292T0 SequenceType object (3)

Length: 589 aa      View alignments
>bmy_06292T0
MKWFFSSTLMWMAVVVTSWVIIAAASDTSAARSCSECHSNATCTEDGAATTCSCQTGFTGDGLECEDLDECATPGTHNCSAPSSCVNTPGSYTCVCPEGFRLSSELGCTDVDECAEPGLSHCHALATCVNSEGNYSCVCPAGYWGDGRHCECSPGSCGPGLDCVHXGDTLVCADPCQVHRILDEYWRSAQYGAGYACDSDVAGWYRFVGLGGVRLAETCVPVLRCNTAAPMWLNGTHPSSGEGIVSRRACAHWSGHCCLWDTPVQVKACAGGYYVYNLTAPPECHLAYCTDPGSVEGTCEECSVDEDCKSDNGRWHCQCKQDLSITDLSLLERRLECGVSDIKLSLGKCQLKSLGFEKVFMYLRDSQCSGFTERGDRDWMSVVTPARDGPCGTVMTRNETHATYSNTLYLADELIIRDRNIKINFACSYPLDMKVSLKTSLQPMRPKHQHGWDRNVHRVDGALPEPYLHTALPRLLRDPVHRGLSLCGHHAGWGRLVPIFRFAGNYDLVYLHCEVYLCDTVNEKCKPTCSETRFRSGGIIDQTHVLNLGPITRKGSQAAVSRAASSSLGLLKVWLPLLLSATLTLMSQ*