Sequence detailsbmy_06306 (Coding sequence)

Part of scaffold_237 (SequenceType object (1))

For more information consult the page for scaffold_237 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PIGMENSTTRG00000001822 (Bottlenosed dolphin)

Gene Details

phosphatidylinositol glycan anchor biosynthesis, class M

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000001714, Bottlenosed dolphin)

Protein Percentage 95.98%
cDNA percentage 97.64%
Ka/Ks Ratio 0.59146 (Ka = 0.0196, Ks = 0.0332)

PIGMENSBTAG00000002419 (Cow)

Gene Details

GPI mannosyltransferase 1

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000003140, Cow)

Protein Percentage 94.8%
cDNA percentage 93.77%
Ka/Ks Ratio 0.15456 (Ka = 0.0266, Ks = 0.1719)

PIGM (Minke Whale)

Gene Details

phosphatidylinositol glycan anchor biosynthesis, class M

External Links

Gene match (Identifier: BACU003884, Minke Whale)

Protein Percentage 87.72%
cDNA percentage 90.82%
Ka/Ks Ratio 0.65707 (Ka = 0.0818, Ks = 0.1245)

Additional orthologs identified in other species via the OPTIC pipeline.

PIGM (Human)   Pigm (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1272 bp    Location:368038..366767   Strand:-
Raw sequence 
>bmy_06306
ATGAGCCCGACCACGCACTGGGGAGAGTGGTTCCTGAATCTGTGGGTGCCCCCCGCCGGTGTATTTGGTGTGGCCTTCCTTGCCCGAGTGGCCCTGGTTTTCTATGGGCTCTTCCAGGACCGGACTCTGCTCGTGAGGTATACAGACATCGACTACCAGGTCTTCACCGACGCCGCGCGTTTCGTCACGGAAGGGCGCTCCCCTTACCTGAGGGCGACGTACCGTTACACTCCGCTGCTGGGGTGGCTCCTCACTCCCAACATCTATCTCAATGAGCTCTTTGGAAAGTTTCTCTTCATCAGCTTCGACCTCCTCACCGCCTTCATCTTATACCGGCTACTGCTTCTTAAGGGGCTGGGTCGCCGCCAGGCTTGCGGTTACTGTGTCTTTTGGCTTCTTAACCCCCTACCTATGGCGGTGTCCAGCCGAGGCAATGCGGACTCAATCGTCTCCTCCCTGGTGCTTATGACCCTGTACCTAATAGAAAAAAGGCTCGTCGCGTGTGCTGCTATATTCTATGGTTTCGCAGTGCATTTGAAGATGTATCCGGTGACCTATATCCTTCCCATAGCACTCCACTTGCTTCCGGAACGCGACAGCGACGAAGGCCTCCGTCAATTCCGGTATTCTTTCCAGGCTCGTCTGTATGAATTCCTGAAGAGGCTGTGTAATCGGGCTGTGCTGCTCTTCGTAGCCGTTGCTGGACTCACGTTTTTTGCCCTGAGCTTCAGTTTTTACTACAAATATGGTTGGGAGTTTTTGGAGCACACCTACCTGTATCACCTGACCAGGCGGGATATCCGTCACAACTTCTCTCCATACTTCTACATGCTGTATTTGACCGCAGAGAGCAAGTGGAGTTTTTCCCTGGGAATTGCCGCATTCCTGCCACAATTCATCTTGCTTTCAGCAGTGTCTTTCGCTTATTAYAGAGACCTTGCCTTTTGTTGTTTTCTTCATACGTCTATTTTTGTGACATTTAACAAAGTCTGCACCTCCCAGTACTTTCTTTGGTACCTCTGCCTCCTGCCCCTTGTGATGCCACTAGTGAGAATGCCTTGGAGAAGAGCTGTGGTTCTCCTGACGTTATGGTTCATAGGGCAGGCCTTATGGCTGGCTCCTGCTTATGTTCTTGAGTTTCAAGGAAAGAACACCTTTCTGTTTATCTGGTTAGCTGGTTTGTTCTTCCTCCTTATCAACTGTTCCATCCTCATTCAAATCATTTCCCATTACAAGGAGGAACCCCTGACAGACAGAACCAAATATGACTGA

Related Sequences

bmy_06306T0 SequenceType object (3)

Length: 424 aa      View alignments
>bmy_06306T0
MSPTTHWGEWFLNLWVPPAGVFGVAFLARVALVFYGLFQDRTLLVRYTDIDYQVFTDAARFVTEGRSPYLRATYRYTPLLGWLLTPNIYLNELFGKFLFISFDLLTAFILYRLLLLKGLGRRQACGYCVFWLLNPLPMAVSSRGNADSIVSSLVLMTLYLIEKRLVACAAIFYGFAVHLKMYPVTYILPIALHLLPERDSDEGLRQFRYSFQARLYEFLKRLCNRAVLLFVAVAGLTFFALSFSFYYKYGWEFLEHTYLYHLTRRDIRHNFSPYFYMLYLTAESKWSFSLGIAAFLPQFILLSAVSFAYYRDLAFCCFLHTSIFVTFNKVCTSQYFLWYLCLLPLVMPLVRMPWRRAVVLLTLWFIGQALWLAPAYVLEFQGKNTFLFIWLAGLFFLLINCSILIQIISHYKEEPLTDRTKYD*