Part of scaffold_237 (Scaffold)

For more information consult the page for scaffold_237 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

VANGL2 ENSTTRG00000001841 (Bottlenosed dolphin)

Gene Details

VANGL planar cell polarity protein 2

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000001732, Bottlenosed dolphin)

Protein Percentage 95.39%
cDNA percentage 94.11%
Ka/Ks Ratio 0.001 (Ka = 0.0001, Ks = 0.0831)

VANGL2 ENSBTAG00000006560 (Cow)

Gene Details

vang-like protein 2

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000008613, Cow)

Protein Percentage 100.0%
cDNA percentage 96.55%
Ka/Ks Ratio 0.001 (Ka = 0.0002, Ks = 0.2337)

VANGL2  (Minke Whale)

Gene Details

VANGL planar cell polarity protein 2

External Links

Gene match (Identifier: BACU003873, Minke Whale)

Protein Percentage 99.62%
cDNA percentage 99.36%
Ka/Ks Ratio 0.057 (Ka = 0.0016, Ks = 0.0274)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1566 bp    Location:719989..728651   Strand:+
>bmy_06318
ATGGACACCGAGTCCCAGTACTCGGGCTATTCCTACAAGTCGGGCCACTCCCGCAGCTCCCGCAAGCACAGGGACCGTCGGGACCGACACCGCTCTAAGAGCCGAGACGGGAGCCGTGGGGACAAGTCGGTGACGATCCAGGCTCCAGGGGAGCCCCTGCTGGACAATGAGTCCACGAGAGGGGATGAGCGGGACGACAACTGGGGGGAGACGACCACAGTAGTAACGGGCACCTCGGAGCACAGCATCTCCCACGATGACCTCACGCGCATTGCCAAGGACATGGAGGACAGCGTCCCGCTGGACTGCTCCCGGCACCTGGGCGTGGCGGCGGGGGCCACGCTGGCCCTGCTCTCTTTCCTCACGCCGCTGGCTTTCCTGCTGCTGCCCCCACTGCTGTGGCGGGAGGAGCTGGAGCCGTGCGGGACAGCCTGCGAGGGCCTCTTCATCTCCGTGGCCTTCAAGCTGCTCATCCTGCTGCTGGGCAGCTGGGCCCTGTTCTTCCGCCGGCCCAAGGCCTCTCTGCCCCGTGTCTTCGTGCTGCGTGCCCTGCTCATGGTGCTCGTCTTCCTGCTCGTCGTCTCCTACTGGCTCTTCTACGGCGTGCGCATCCTGGACGCCCGCGAGCGCAGCTACCAGGGCGTGGTGCAGTTTGCCGTGTCGCTGGTAGATGCCCTGCTCTTCGTGCACTACCTGGCTGTGGTCCTGCTGGAGCTGCGCCAGCTCCAGCCTCAGTTCACGCTCAAGGTCGTGCGCTCCACCGACGGGGCCAGCCGCTTCTACAACGTGGGCCATCTCAGCATCCAGCGCGTGGCAGTATGGATCCTGGAGAAGTATTACCATGACTTCCCTGTCTACAACCCTGCCCTCCTCAACCTGCCCAAGTCCGTCCTGGCCAAGAAAGTGTCTGGCTTCAAGGTGTATTCCCTCGGAGAGGAAAACAGCACCAACAACTCCACGGGCCAGTCCCGGGCTGTGATTGCAGCAGCGGCCCGGAGGCGGGACAACAGCCACAACGAGTACTACTACGAGGAGGCCGAGCATGAGCGGAGGGTGCGCAAGAGGAGGGCCAGGCTTGTAGTGGCCGTGGAGGAGGCCTTCACTCACATTAAGCGGCTGCAGGAAGAGGAACAGAAGAACCCCAGGGAGGTGATGGACCCACGGGAGGCAGCCCAGGCCATCTTCGCGTCCATGGCCCGTGCCATGCAGAAGTACCTTCGCACCACCAAGCAGCAGCCTTACCACACCATGGARAGCATCCTGCAGCACCTTGAGTTCTGCATCACTCACGACATGACACCCAAGGCCTTCCTGGAGCGGTACCTGGCGGCTGGACCCACCATCCAGTACCACAAGGAACGCTGGCTGGCCAAACAGTGGACACTGGTGAGCGAGGAGCCGGTGACCAACGGGCTCAAGGATGGCATCGTTTTCCTCTTGAAACGCCAGGACTTCAGCCTGGTGGTCAGCACCAAGAAGGTCCCATTCTTCAAACTCTCCGAGGAATTTGTGGACCCCAAGTCGCACAAGTTTGTCATGAGGCTGCAGTCTGAGACCTCGGTGTGA

Related Sequences

bmy_06318T0 Protein

Length: 522 aa      View alignments
>bmy_06318T0
MDTESQYSGYSYKSGHSRSSRKHRDRRDRHRSKSRDGSRGDKSVTIQAPGEPLLDNESTRGDERDDNWGETTTVVTGTSEHSISHDDLTRIAKDMEDSVPLDCSRHLGVAAGATLALLSFLTPLAFLLLPPLLWREELEPCGTACEGLFISVAFKLLILLLGSWALFFRRPKASLPRVFVLRALLMVLVFLLVVSYWLFYGVRILDARERSYQGVVQFAVSLVDALLFVHYLAVVLLELRQLQPQFTLKVVRSTDGASRFYNVGHLSIQRVAVWILEKYYHDFPVYNPALLNLPKSVLAKKVSGFKVYSLGEENSTNNSTGQSRAVIAAAARRRDNSHNEYYYEEAEHERRVRKRRARLVVAVEEAFTHIKRLQEEEQKNPREVMDPREAAQAIFASMARAMQKYLRTTKQQPYHTMESILQHLEFCITHDMTPKAFLERYLAAGPTIQYHKERWLAKQWTLVSEEPVTNGLKDGIVFLLKRQDFSLVVSTKKVPFFKLSEEFVDPKSHKFVMRLQSETSV*