Part of scaffold_237 (Scaffold)

For more information consult the page for scaffold_237 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SLAMF1 ENSTTRG00000002658 (Bottlenosed dolphin)

Gene Details

signaling lymphocytic activation molecule family member 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000002492, Bottlenosed dolphin)

Protein Percentage 94.19%
cDNA percentage 95.85%
Ka/Ks Ratio 0.42885 (Ka = 0.0309, Ks = 0.072)

SLAMF1 ENSBTAG00000007927 (Cow)

Gene Details

signaling lymphocytic activation molecule precursor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000010425, Cow)

Protein Percentage 82.5%
cDNA percentage 86.39%
Ka/Ks Ratio 0.27502 (Ka = 0.0997, Ks = 0.3627)

SLAMF1  (Minke Whale)

Gene Details

signaling lymphocytic activation molecule family member 1

External Links

Gene match (Identifier: BACU003870, Minke Whale)

Protein Percentage 94.17%
cDNA percentage 94.32%
Ka/Ks Ratio 0.22408 (Ka = 0.0354, Ks = 0.1579)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 726 bp    Location:977243..966537   Strand:-
>bmy_06321
ATGGATCCCAAGGGGCTCCTCTCCTTGAACGTCCTGCTGTTTTTCTCCCTAGCTTTTGAGCTGAGCTGCAGAACAGGTGAGGGCTCAACGAATTGCCCAGTGATGATCCTTGGGCGGCTGGGAAGCAGTGTGCTGCTGCCCCTGACATCTGAGGGGATAAGCAAGAGCATGAATAAGAGTATCCACATCCTTGTCACAATGGCAGAATCACCCATAGACACCATCAAGAAGAAAATAGTGTCCCTGGATCTGCGGAAAGGTGACTCTCCAMGCCATCTGGAGAATGGCTATGAGTTTCATCCAGAAAACCTGAGCCTGAGGATCCTGAAAAGCAGGAAGGAGGATGAGGGCTGGTACTTTATGAGCCTGGAGGAAAACGTTTCAGTCCAGCAATTTTGCTTGCAGCTGAAGCTCTATGAACAGGTCTCCACTCCGGAAATTAAGGTGTTGAACTCCAGCCAGGAGAACGGGACCTGTAGCCTGATGCTGGCCTGCATGGTGGAGAAAGGGGACCATGTAGCTTACAACTGGAGTGAGGAGGCGGGTGCCCCCCTGCTGAGCCCCACCAAGAACTCCCACCTCCTGTATCTCACCCTTGGCCCTCAGGATGCCAACAACATCTACATCTGCACCGTGAGCAATCCCATCAGCAATGGCTCTCAGACCTTCATCCCGTGGTCCAGATGCAGCCTCGGTTCCTCAGGTGAGTGCCCTTGTGGCGGCTAG

Related Sequences

bmy_06321T0 Protein

Length: 242 aa      View alignments
>bmy_06321T0
MDPKGLLSLNVLLFFSLAFELSCRTGEGSTNCPVMILGRLGSSVLLPLTSEGISKSMNKSIHILVTMAESPIDTIKKKIVSLDLRKGDSPXHLENGYEFHPENLSLRILKSRKEDEGWYFMSLEENVSVQQFCLQLKLYEQVSTPEIKVLNSSQENGTCSLMLACMVEKGDHVAYNWSEEAGAPLLSPTKNSHLLYLTLGPQDANNIYICTVSNPISNGSQTFIPWSRCSLGSSGECPCGG*