Part of scaffold_237 (Scaffold)

For more information consult the page for scaffold_237 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PPOX ENSTTRG00000009205 (Bottlenosed dolphin)

Gene Details

protoporphyrinogen oxidase

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000008725, Bottlenosed dolphin)

Protein Percentage 98.32%
cDNA percentage 97.96%
Ka/Ks Ratio 0.21051 (Ka = 0.0095, Ks = 0.0453)

PPOX ENSBTAG00000021894 (Cow)

Gene Details

protoporphyrinogen oxidase

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000053328, Cow)

Protein Percentage 93.92%
cDNA percentage 93.71%
Ka/Ks Ratio 0.22073 (Ka = 0.0318, Ks = 0.1442)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1674 bp    Location:1378803..1382542   Strand:+
>bmy_06340
ATGGGCCGGACCGTGGTCGTGCTGGGCGGAGGGATAAGCGGCTTGGCTGCTAGTTACCACCTGAGCCGGGCCCCTTGTCCCCCCAAGGTGGTCTTGGTGGAGAGCAGCGAGCGCCTGGGAGGCTGGATCCGCTCGGTACGAGGGCCAGATGGTGCTGTCTTTGAACTTGGACCTCGAGGAATTCGGCCGGCGGGAGTCCTGGGAGCCCGGACCCTGCTCATGGTTTCCGAGCTTGGCTTGGACTCAGAAGTGTTGCCTGTCCGGGGAGACCATGCAGCTGCCCAGAACAGGTTCCTGTATGTAGGTGGCGCCCTGCACGCCCTGCCCTCTGGCATCAGGGGGCTACTCCGCCCTTCACCTCCCTTCTCCAAACCTCTGTTTTGGGCTGGGCTGAAGGAGTTGACTACGCCCCGGGGCAAAGACCCTGACGAGACTGTGCACAGTTTCGCCGAGCGCCGCCTTGGTCCTGAGGTAACACCGCCCAGAAGCCCCCAAATCCCTCCCCTCCTAAACCAGCTGCAGATCCCCGTACTCGCACCTCCCAGTAGGGCCTCTTCTGTATCATCTGAAAATGCCCTCTTCTCTTCATACCCATGGGACTGCTTTCCAACCAAACCCCACCCCACCTCACCCCTATTCTCTGCCAAGCAGGGACAGTGGAAATTAGTGCAGCTTATTCCTTGGTCTCTCAATCCCAGTCTCACCCTTAAGGTGGCGTCTCTAGCCATGGACAGTCTTTGCCGTGGAGTGTTTGCAGGCAACAGCCGTGAGCTCAGCATGAGGTCCTGCTTTCCCAGTCTCTTCCAAGCTGAGCAAACCCATCGTTCCATATTACTGGGGCTGCTGCTGGGGGCAGGGCAGGGCCCACAGCCAGACTCAGCACTTATTCGCCAGGCTCGGGCTGAGCGCTGGAGCCAGTGGTCACTCCGTGGAGGGCTGGAGACATTGCCTCAGGCCCTTAACACCCACCTGACTAGTAGAGGTGTCAGTGTTCTCAAAGGCCAGCCAGTCTGTGGGCTCAGCCTCCAAGCAGAAGGGTGCTGGAAGGTGTCTCTAGGGGACAGCAACCTGGAGGCTGACCACATTATTAGTGCCATTCCAGCTTCAGTGCTCAGCAAGCTGCTCCCTGCCGAGGCTGCACCTCTGGCTCGTGCTCTGAGTACCATCACTGCTGTGTCTGTGGCTGTGGTGAATCTACAGTACCGAGGAGCTCGTCTGCCTGTCCAGGGATTTGGACATCTGGTGCCATCCTCAGAAGACCCAGGCATCCTGGGAATCGTGTATGACTCAGTTGCTTTCCCTGAGCAGGATGGGAGCCCCCCTGGCCTCAGAGTGACTGTGATGTTGGGAGGTTCCTGGTTACAGACATTAGAAGCCAGGGGCAGTGTCTTATCTCAGGAGCTGTTCCAAAAGGAGGCAGAGAAAGCAGCTGCCACTCAGTTAGGACTGAAGGAGCCACCAAGTCACTGCTTGGTCCATCTACACAAGAACTGTATCCCCCAGTATACTTTAGGCCACTGGCAAAAATTGGAGTCAGCTACCCAATTCCTGGCTGCTCAGAAGCTGCCTTTGACTCTGGCCGGAGCCTCGTATGAGGGGGTTGCTGTCAATGATTGTATAGAGAGTGGGCGCCAGGCAGCAGCCCGTGTCCTGGGCACAGAACCTAACAGTTGA

Related Sequences

bmy_06340T0 Protein

Length: 558 aa      View alignments
>bmy_06340T0
MGRTVVVLGGGISGLAASYHLSRAPCPPKVVLVESSERLGGWIRSVRGPDGAVFELGPRGIRPAGVLGARTLLMVSELGLDSEVLPVRGDHAAAQNRFLYVGGALHALPSGIRGLLRPSPPFSKPLFWAGLKELTTPRGKDPDETVHSFAERRLGPEVTPPRSPQIPPLLNQLQIPVLAPPSRASSVSSENALFSSYPWDCFPTKPHPTSPLFSAKQGQWKLVQLIPWSLNPSLTLKVASLAMDSLCRGVFAGNSRELSMRSCFPSLFQAEQTHRSILLGLLLGAGQGPQPDSALIRQARAERWSQWSLRGGLETLPQALNTHLTSRGVSVLKGQPVCGLSLQAEGCWKVSLGDSNLEADHIISAIPASVLSKLLPAEAAPLARALSTITAVSVAVVNLQYRGARLPVQGFGHLVPSSEDPGILGIVYDSVAFPEQDGSPPGLRVTVMLGGSWLQTLEARGSVLSQELFQKEAEKAAATQLGLKEPPSHCLVHLHKNCIPQYTLGHWQKLESATQFLAAQKLPLTLAGASYEGVAVNDCIESGRQAAARVLGTEPNS*