Sequence detailsbmy_06340 (Coding sequence)

Part of scaffold_237 (SequenceType object (1))

For more information consult the page for scaffold_237 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PPOXENSTTRG00000009205 (Bottlenosed dolphin)

Gene Details

protoporphyrinogen oxidase

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000008725, Bottlenosed dolphin)

Protein Percentage 98.32%
cDNA percentage 97.96%
Ka/Ks Ratio 0.21051 (Ka = 0.0095, Ks = 0.0453)

PPOXENSBTAG00000021894 (Cow)

Gene Details

protoporphyrinogen oxidase

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000053328, Cow)

Protein Percentage 93.92%
cDNA percentage 93.71%
Ka/Ks Ratio 0.22073 (Ka = 0.0318, Ks = 0.1442)

Additional orthologs identified in other species via the OPTIC pipeline.

PPOX (Human)   Ppox (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1674 bp    Location:1378803..1382542   Strand:+
Raw sequence 
>bmy_06340
ATGGGCCGGACCGTGGTCGTGCTGGGCGGAGGGATAAGCGGCTTGGCTGCTAGTTACCACCTGAGCCGGGCCCCTTGTCCCCCCAAGGTGGTCTTGGTGGAGAGCAGCGAGCGCCTGGGAGGCTGGATCCGCTCGGTACGAGGGCCAGATGGTGCTGTCTTTGAACTTGGACCTCGAGGAATTCGGCCGGCGGGAGTCCTGGGAGCCCGGACCCTGCTCATGGTTTCCGAGCTTGGCTTGGACTCAGAAGTGTTGCCTGTCCGGGGAGACCATGCAGCTGCCCAGAACAGGTTCCTGTATGTAGGTGGCGCCCTGCACGCCCTGCCCTCTGGCATCAGGGGGCTACTCCGCCCTTCACCTCCCTTCTCCAAACCTCTGTTTTGGGCTGGGCTGAAGGAGTTGACTACGCCCCGGGGCAAAGACCCTGACGAGACTGTGCACAGTTTCGCCGAGCGCCGCCTTGGTCCTGAGGTAACACCGCCCAGAAGCCCCCAAATCCCTCCCCTCCTAAACCAGCTGCAGATCCCCGTACTCGCACCTCCCAGTAGGGCCTCTTCTGTATCATCTGAAAATGCCCTCTTCTCTTCATACCCATGGGACTGCTTTCCAACCAAACCCCACCCCACCTCACCCCTATTCTCTGCCAAGCAGGGACAGTGGAAATTAGTGCAGCTTATTCCTTGGTCTCTCAATCCCAGTCTCACCCTTAAGGTGGCGTCTCTAGCCATGGACAGTCTTTGCCGTGGAGTGTTTGCAGGCAACAGCCGTGAGCTCAGCATGAGGTCCTGCTTTCCCAGTCTCTTCCAAGCTGAGCAAACCCATCGTTCCATATTACTGGGGCTGCTGCTGGGGGCAGGGCAGGGCCCACAGCCAGACTCAGCACTTATTCGCCAGGCTCGGGCTGAGCGCTGGAGCCAGTGGTCACTCCGTGGAGGGCTGGAGACATTGCCTCAGGCCCTTAACACCCACCTGACTAGTAGAGGTGTCAGTGTTCTCAAAGGCCAGCCAGTCTGTGGGCTCAGCCTCCAAGCAGAAGGGTGCTGGAAGGTGTCTCTAGGGGACAGCAACCTGGAGGCTGACCACATTATTAGTGCCATTCCAGCTTCAGTGCTCAGCAAGCTGCTCCCTGCCGAGGCTGCACCTCTGGCTCGTGCTCTGAGTACCATCACTGCTGTGTCTGTGGCTGTGGTGAATCTACAGTACCGAGGAGCTCGTCTGCCTGTCCAGGGATTTGGACATCTGGTGCCATCCTCAGAAGACCCAGGCATCCTGGGAATCGTGTATGACTCAGTTGCTTTCCCTGAGCAGGATGGGAGCCCCCCTGGCCTCAGAGTGACTGTGATGTTGGGAGGTTCCTGGTTACAGACATTAGAAGCCAGGGGCAGTGTCTTATCTCAGGAGCTGTTCCAAAAGGAGGCAGAGAAAGCAGCTGCCACTCAGTTAGGACTGAAGGAGCCACCAAGTCACTGCTTGGTCCATCTACACAAGAACTGTATCCCCCAGTATACTTTAGGCCACTGGCAAAAATTGGAGTCAGCTACCCAATTCCTGGCTGCTCAGAAGCTGCCTTTGACTCTGGCCGGAGCCTCGTATGAGGGGGTTGCTGTCAATGATTGTATAGAGAGTGGGCGCCAGGCAGCAGCCCGTGTCCTGGGCACAGAACCTAACAGTTGA

Related Sequences

bmy_06340T0 SequenceType object (3)

Length: 558 aa      View alignments
>bmy_06340T0
MGRTVVVLGGGISGLAASYHLSRAPCPPKVVLVESSERLGGWIRSVRGPDGAVFELGPRGIRPAGVLGARTLLMVSELGLDSEVLPVRGDHAAAQNRFLYVGGALHALPSGIRGLLRPSPPFSKPLFWAGLKELTTPRGKDPDETVHSFAERRLGPEVTPPRSPQIPPLLNQLQIPVLAPPSRASSVSSENALFSSYPWDCFPTKPHPTSPLFSAKQGQWKLVQLIPWSLNPSLTLKVASLAMDSLCRGVFAGNSRELSMRSCFPSLFQAEQTHRSILLGLLLGAGQGPQPDSALIRQARAERWSQWSLRGGLETLPQALNTHLTSRGVSVLKGQPVCGLSLQAEGCWKVSLGDSNLEADHIISAIPASVLSKLLPAEAAPLARALSTITAVSVAVVNLQYRGARLPVQGFGHLVPSSEDPGILGIVYDSVAFPEQDGSPPGLRVTVMLGGSWLQTLEARGSVLSQELFQKEAEKAAATQLGLKEPPSHCLVHLHKNCIPQYTLGHWQKLESATQFLAAQKLPLTLAGASYEGVAVNDCIESGRQAAARVLGTEPNS*