Part of scaffold_237 (Scaffold)

For more information consult the page for scaffold_237 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

ADAMTS4 ENSTTRG00000009212 (Bottlenosed dolphin)

Gene Details

ADAM metallopeptidase with thrombospondin type 1 motif, 4

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000008731, Bottlenosed dolphin)

Protein Percentage 97.81%
cDNA percentage 97.77%
Ka/Ks Ratio 0.17894 (Ka = 0.0104, Ks = 0.058)

ADAMTS4 ENSBTAG00000013210 (Cow)

Gene Details

A disintegrin and metalloproteinase with thrombospondin motifs 4 precursor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000017583, Cow)

Protein Percentage 93.81%
cDNA percentage 91.71%
Ka/Ks Ratio 0.10454 (Ka = 0.0312, Ks = 0.2982)

ADAMTS4  (Minke Whale)

Gene Details

ADAM metallopeptidase with thrombospondin type 1 motif, 4

External Links

Gene match (Identifier: BACU003855, Minke Whale)

Protein Percentage 99.1%
cDNA percentage 98.93%
Ka/Ks Ratio 0.13699 (Ka = 0.0041, Ks = 0.0303)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2331 bp    Location:1404006..1397080   Strand:-
>bmy_06342
ATGTCCCGGACAGACTCGCATCCCGGGAGGGGCTTGGCGGAGTGCTGCCTGTGGGGAATCCAACCCCGCCTGCTGCTCCCCACCGTGCCCGTCTCCGGGCCGCTTCTGCTGCTGCTGGCCTCCCTTCTGCCCTCAGCCTGGCCGGCCAGCCCCCTCCCCCGGGAGGAGGAGATCGTGTTTCCAGAGAAGCTCAACGACAGCGTCCTGCCTGGTTTGGGCACCCCTGCCAGGCTGTTGTACCGCTTGCCGGCCTTTGGGGAGATGCTGCTACTAGAGCTGGAGCAGGACCCCGGCGTGCGGGTGGAGGGGCTGACGGTGCAATACCTGGGCCGGGCGCCTGAGCTCCTGGGCGGGGCAGAGCCGGGCACCTACCTCACTGGCACCATCAATGGAGATCCGGAGTCGGTGGCATCTCTGCACTGGGATGGGGGAGCTCTGTTAGGGGTGCTGCAGTATCGAGGGACCGAACTCCACATCCAGCCCCTGGAAGGAGGCACCCCTAACTCTGCTGGTGGGCCTGGGGCTCACATTCTACGCCGGAAGAGTCCTGCCAGCGGCCAGGGCCCCATTTGCAATGTCCAGGCTCCTCCCGGGAACCCCAGTTCCAGCCCACGAAGAGCCAAGCGCTTTGCTTCACTGAGTAGATTTGTGGAGACCCTGGTGGTGGCAGATGACAAGATGGCGGCATTTCACGGTGGTGGGCTAAAGCGCTACCTGCTGACGGTCATGGCAGCAGCGGCCAAGGCCTTCAAGCACCCAAGCATCCGCAACCCTGTCAGCTTGGTGGTGACTCGGCTAGTGATTCTGGGGCCAGGTGAGGAAGGGCCCCAAGACCTGTGTGGGGTCTCTACTTGTGACACTCTAGGCATGGCTGATGTGGGCACTGTGTGTGACCCAGCTCGGAGCTGTGCTATCGTGGAGGATGATGGGCTCCAATCAGCCTTCACTGCTGCTCATGAACTGGGCCATGTCTTCAACATGCTCCATGACAACTCAAAGCCATGTGTTGGTCTGAATGGGCCTGGGAGTACCTCCCGCCATGTCATGGCTCCTGTGATGGCTCACGTGGATCCCGAGGAGCCCTGGTCCCCCTGCAGTGCCCGCTTCATCACTGACTTCCTGGACAATGGCTATGGGCAGTGTCTCTTAGACAAGCCAGAGGCTCCCCTGCACCTGCCTGTGACTTTCCCCGGCAAGGACTATGATGCTGACCGCCAGTGCCAGCTGACCTTTGGGCCTGACTCACGCCATTGTCCGCAGCTGCCGCCGCCCTGTGCTGCCCTCTGGTGCTCTGGCCATCTCAATGGCCACTCCATGTGCCAGACCAAGCATTCACCCTGGGCTGATGGTACCCCCTGTGGGCCCGCACAGGCCTGTATGGGTGGCCGCTGCCTCCACGTGGACCAGCTCCAGGACTTCAATATCCCACAGGCTGGTGGCTGGGGCCCCTGGGGATCATGGGGTGACTGCTCTCGGAGCTGTGGAGGTGGTGTCCAGTTCTCTTCCCGGGACTGCACACGGCCCATCCCCCGGAATGGTGGCAAGTACTGTGAGGGCCGCCATACCCGCTTTCGTTCCTGCAATACCCAGGACTGCCCAACTGGCTCAGCACTGACCTTCCGTGAAGAGCAGTGTGCTGCCTACAACCACCGCACTGACCTCTTCAAGAACTTCCCAGGGCCCATGGACTGGGTTCCTCGCTACACAGGTGTGGCGCCCCGGGACCAGTGCAAACTCACCTGCCAGGCCCGGGCACTGGGCTACTACTATGTGCTGGAGCCACGGGTGGTAGATGGGACCCCCTGTTCCCCAGACAGCTCCTCAGTCTGCGTCCAGGGCCGCTGCATCCATGCCGGCTGTGACCGCGTCATTGGCTCCAAAAAGAAATTTGACAAGTGCATGGTGTACGGATACAACAATGTGGTCACCATCCCCGCAGGGGCCACCCACATCCTGGTCCGGCAGCAGGGTACCCCTGGTGTCCGGAGCCTCTACCTGGCCCTGAAGCTCCCCGATGGCTCCTATGCCCTCAATGGTGAATACACGCTGATACCCTCCCCCACAGACGTGGTCCTGCCCGGGGCAGTCAGCTTGCGCTACAGCGGGGCCACTGCAGCCTCGGAGACACTGTCCGGCCACGGGCCCCTGGCTCAGCCCTTAACGCTGCAGGTCCTGGTGGCTGGCAACCCCCAGAACGTACGCCTCCGCTACAGCTTCTTCGTGCCCTGGCCAGCCCCTTCAACGCCACGCCCCCCTCCCCAGGACTGGCTGCACCGCAAGGCCCAGATTCTGGAGATCCTCCGGCGGCGCTCCTGGGCGGGCAGGAAATAA

Related Sequences

bmy_06342T0 Protein

Length: 777 aa      View alignments
>bmy_06342T0
MSRTDSHPGRGLAECCLWGIQPRLLLPTVPVSGPLLLLLASLLPSAWPASPLPREEEIVFPEKLNDSVLPGLGTPARLLYRLPAFGEMLLLELEQDPGVRVEGLTVQYLGRAPELLGGAEPGTYLTGTINGDPESVASLHWDGGALLGVLQYRGTELHIQPLEGGTPNSAGGPGAHILRRKSPASGQGPICNVQAPPGNPSSSPRRAKRFASLSRFVETLVVADDKMAAFHGGGLKRYLLTVMAAAAKAFKHPSIRNPVSLVVTRLVILGPGEEGPQDLCGVSTCDTLGMADVGTVCDPARSCAIVEDDGLQSAFTAAHELGHVFNMLHDNSKPCVGLNGPGSTSRHVMAPVMAHVDPEEPWSPCSARFITDFLDNGYGQCLLDKPEAPLHLPVTFPGKDYDADRQCQLTFGPDSRHCPQLPPPCAALWCSGHLNGHSMCQTKHSPWADGTPCGPAQACMGGRCLHVDQLQDFNIPQAGGWGPWGSWGDCSRSCGGGVQFSSRDCTRPIPRNGGKYCEGRHTRFRSCNTQDCPTGSALTFREEQCAAYNHRTDLFKNFPGPMDWVPRYTGVAPRDQCKLTCQARALGYYYVLEPRVVDGTPCSPDSSSVCVQGRCIHAGCDRVIGSKKKFDKCMVYGYNNVVTIPAGATHILVRQQGTPGVRSLYLALKLPDGSYALNGEYTLIPSPTDVVLPGAVSLRYSGATAASETLSGHGPLAQPLTLQVLVAGNPQNVRLRYSFFVPWPAPSTPRPPPQDWLHRKAQILEILRRRSWAGRK*