Sequence detailsbmy_06359 (Coding sequence)

Part of scaffold_243 (SequenceType object (1))

For more information consult the page for scaffold_243 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TBC1D17ENSTTRG00000014949 (Bottlenosed dolphin)

Gene Details

TBC1 domain family, member 17

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000014171, Bottlenosed dolphin)

Protein Percentage 97.69%
cDNA percentage 98.05%
Ka/Ks Ratio 0.14237 (Ka = 0.0097, Ks = 0.0681)

BT.12647ENSBTAG00000047035 (Cow)

Gene Details

TBC1 domain family member 17

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000007578, Cow)

Protein Percentage 95.54%
cDNA percentage 93.23%
Ka/Ks Ratio 0.053 (Ka = 0.0202, Ks = 0.3817)

TBC1D17 (Minke Whale)

Gene Details

TBC1 domain family, member 17

External Links

Gene match (Identifier: BACU011064, Minke Whale)

Protein Percentage 98.46%
cDNA percentage 98.62%
Ka/Ks Ratio 0.12817 (Ka = 0.0064, Ks = 0.0498)

Additional orthologs identified in other species via the OPTIC pipeline.

TBC1D17 (Human)   Tbc1d17 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1980 bp    Location:159017..146488   Strand:-
Raw sequence 
>bmy_06359
ATGGAGGGCGCCGGTTACAGGGTGGTATTTGAGAAAGGAGGCGTGTACCTGCACACCAGTGCCAAGAAGCACCAAGACCCGGACTCCCTCATCGCCGGCGTCATCCGTGTTGTGGAGAAGGACAATGACGTCCTCCTGCACTGGGCTCCTGTAGAGGAGGCTGGAGATTCCACCCAAATCTTCTTCTCCAAGAAGGACACCAGTGGGGGAGACTCCTGCACCTCTGAGGAGGAACCAACCTTTGACCCCGGCTATGAACCCGACTGGGCCGTCATCAGCACCGTGCGGCCACGGCCCCGCCACTCAGAGCCCACGAGAGGTGCAGAGCCCAGCTCCCCCCGGGGCTCCTGGGCCTTCTCCGTGAGTCTGGGGGAGCTCAAGTCCATCCGCCGTTCCAAGCCGGGCCTCAGCTGGGCATACCTGGTCCTGGTCACACAGGCCGGAGGCTCCCTGCCCGCCCTGCACTTCCACCGCGGGGGCACCCGCGCCCTGCTCCGTGTCCTCAGCCGTTACCTGCTGTTGGCCAGCTCCCCGCAGGACTCCCGCCTCTACCTTGTCTTCCCCCATGACTCCTCGGCCCTCTCCAACTCCTTCCACCACCTCCAGCTGTTTGACCAGGACAGCTCCAACGTGGTGTCTCGCTTCCTCCAGGACCCCTACTCCACCACCTTCAGCAGCTTCTCCCGTGTGACCAACTTCTTCCGGGGAGCCCTGCAGCCGCACCAGGAGGGGGCCTCCCCTGACCTGCCTCCAGGCCCCGATGACGAACCCGAGCCTGGGTTCGAGGTCATTTCCTGTGTGGAGCTAGGGCCGAGGCCGGCTGTGGAGCGGGCGCCTCCGGTCACAGAGGAGGAGTGGGCCTGCCACGTGGGCCCCGAGGGCCGCCTGCAGCAGGTCCCTGAGCTGAAAGCCCGCATCTTCTCAGGGGGTCTGAGCCCCAGCCTGCGACGCGAGGCCTGGAAGTTCCTCCTGGGGTACCTGAGCTGGGAGGGCTCAGCCGAGGAGCACAAGGCCCACGTGCGCAAGAAAACGGACGAGTATTTCCGCATGAAGCTGCAGTGGAAATCTGTGAGCCCGGAGCAGGAACGGAGGAACTCACTGCTGCACGGATACCGCAGCCTCATTGAGAGAGATGTGAGCCGCACCGACAGGACCAACAAATTCTACGAGGGCCCCGAGAACCCGGGGCTGGGCCTGCTGAACGACATCCTCCTTACCTACTGCATGTACCACTTCGACCTCGGCTATGTCCAGGGCATGAGTGACCTTCTCTCCCCGATCCTCTACGTCACTCAGAACGAGGTGGATGCCTTCTGGTGTTTCTGTGGCTTCATGGAGCTTGTGCATGGGAACTTTGAGGAGAGTCAGGAGACAATGAAGCGGCAACTCGGGCAACTCCTGCTCCTCCTGAGGGTGCTGGACCCTCCGCTCTGCGACTTCCTGGACTCCCAGGACTCTGGCTCTCTCTGTTTCTGCTTCCGGTGGCTGCTCATCTGGTTCAAGAGGGAATTCCCCTTCCCGGATGTCCTTCGGCTGTGGGAGGTGCTGTGGACGGGGCTCCCTGGCCCCAGTCTGCACCTGCTGGTGGCCTGCGCCATCCTGGACATGGAGCGGGACACGCTCATGCTTTCAGGCTTCGGGTCCAATGAGATCCTCAAGCACATCAACGAGCTGACCATGAAGCTGAGCGTGGAGGACGTGCTGATGCGGGCCGAGGCCCTCTACCGGCAGCTGACCTCCTGCCGGGAGCTGCCCCACAACGTGCAGGAGATCCTAGGCCTGGCGCCCCCCGCAGAGCCCCAGAGCCCCTCGCCACCTGCCTCCCCACTGCCGCTGTCGCCCACCGGCGCCCCACCGGCTCCGCCGCCCGCCGCGGACACAGTCCCGCAGGCTGACAGCAGCCTGGAGATCCTGCCGGAGGAGGAGGAGGAGGAGGAGGAAGAAGAGGAGGAGGAGGAGGAGGAATGTGCGGACTCTTAA

Related Sequences

bmy_06359T0 SequenceType object (3)

Length: 660 aa      View alignments
>bmy_06359T0
MEGAGYRVVFEKGGVYLHTSAKKHQDPDSLIAGVIRVVEKDNDVLLHWAPVEEAGDSTQIFFSKKDTSGGDSCTSEEEPTFDPGYEPDWAVISTVRPRPRHSEPTRGAEPSSPRGSWAFSVSLGELKSIRRSKPGLSWAYLVLVTQAGGSLPALHFHRGGTRALLRVLSRYLLLASSPQDSRLYLVFPHDSSALSNSFHHLQLFDQDSSNVVSRFLQDPYSTTFSSFSRVTNFFRGALQPHQEGASPDLPPGPDDEPEPGFEVISCVELGPRPAVERAPPVTEEEWACHVGPEGRLQQVPELKARIFSGGLSPSLRREAWKFLLGYLSWEGSAEEHKAHVRKKTDEYFRMKLQWKSVSPEQERRNSLLHGYRSLIERDVSRTDRTNKFYEGPENPGLGLLNDILLTYCMYHFDLGYVQGMSDLLSPILYVTQNEVDAFWCFCGFMELVHGNFEESQETMKRQLGQLLLLLRVLDPPLCDFLDSQDSGSLCFCFRWLLIWFKREFPFPDVLRLWEVLWTGLPGPSLHLLVACAILDMERDTLMLSGFGSNEILKHINELTMKLSVEDVLMRAEALYRQLTSCRELPHNVQEILGLAPPAEPQSPSPPASPLPLSPTGAPPAPPPAADTVPQADSSLEILPEEEEEEEEEEEEEEEECADS*