Part of scaffold_243 (Scaffold)

For more information consult the page for scaffold_243 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

MED25 ENSTTRG00000014885 (Bottlenosed dolphin)

Gene Details

mediator complex subunit 25

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000014130, Bottlenosed dolphin)

Protein Percentage 81.98%
cDNA percentage 83.51%
Ka/Ks Ratio 0.35081 (Ka = 0.1126, Ks = 0.321)

BT.12647 ENSBTAG00000008518 (Cow)

Gene Details

mediator of RNA polymerase II transcription subunit 25

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000040773, Cow)

Protein Percentage 90.04%
cDNA percentage 87.6%
Ka/Ks Ratio 0.1541 (Ka = 0.0701, Ks = 0.4549)

MED25  (Minke Whale)

Gene Details

mediator complex subunit 25

External Links

Gene match (Identifier: BACU011065, Minke Whale)

Protein Percentage 68.57%
cDNA percentage 75.18%
Ka/Ks Ratio 0.45055 (Ka = 0.221, Ks = 0.4906)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1701 bp    Location:212816..198549   Strand:-
>bmy_06363
ATGGTCCCCGGGTCGGAGGGCCCGGCCCGCGCCGGGGGCCTCGTAGCTGACGTGGTGTTTGTAATTGAGGGCACGGCCAACCTGGGGCCCTACTTCGAGGGGCTCCGCAAGCACTACCTGCTCCCGGCCATCGAGTTCATGGGCGGGGGTGGCGAGAGCTGCAGCCTCATCGCAGAAGGCCTCAGCACAGCCCTGCAGCTGTTCGATGACTTCAAAAAGATGCGGGAGCAGATCTGGGGAGGGTGGTCCTCACCAGCCCCTCCCCTCTATCACCAGGTGCCCGGGAACCTGAGTGCAGCCCAGGTGGCTGCCCAGAACGCAGTGGAGGCTGCCAAGAACCAGAAGGCTGGGCTGGGCCCTCGCTTCTCGCCCATCAACCCCCTTCAGCAAGCCGCTCCAGGAGTGGGTCCCCCCTACAGCCAGGCCCAGGCCCCCCCGCTGCCCCCAGGGCCCCCCGGCGCCCCCAAGCCACCTCCTGCTTCCCAGCCCAGCCTGGTCTCCACTGTGGCCCCTGGCCCGGGCCTGGCCCCGCCTGCACAGCCCGGGGCACCATCCATGGCGGGCACCGTGGCCCCAGGCGGGGTGAGTGGCCCTTCTCCGGCCCAGCTCGGGGCCCCGGCCCTCGGCGGGCAGCAGTCAGTCTCCAACAAACTCCTGGCCTGGAGCGGGGTCCTCGAGTGGCAGGAGAAGCCCAAACCTGCCTCCGTGGACGCCAACACCAAGCTGACTCGGTCACTGCCTTGTCAGGTCTACGTGAATCACGGCGAGAACCTGAAAACAGAGCAGTGGCCCCAGAAGCTGATCATGCAGCTCATCCCCCAGCAGCTGCTGACCACCCTGGGCCCTTTGTTCCGGAACTCAAGGATGGTCCAGTTCCACTTCACCAACAAGGACCTGGACTCCCTCAAAGGCCTCTACCGCATCATGGGCAACGGCTTTGCGGGCTGCGTGCACTTCCCGCACACGGCGCCCTGCGAGGTGCGCGTGCTCATGCTCCTGTACTCGTCCAAGAAGAAGATCTTCATGGGCCTCATCCCCTACGACCAGAGCGGCTTCGTCAACGGCATCCGGCAGGTCATCACCAACCACAAGCAGGTCCAGCAGCAGAAGCTGGAGCAGCAGCGCGGGATGGGGGCACAGCAGGCACCCCCGGGGCTGGGCCCCATTCTGGAGGACCAGGCGAGGCCCTCGCAGAACCTGCTCCAGCTCCGCCCACCGCAGCCCCAGCCGCAGGGTACCGTGGGGGCCTCTACGGCCACGGGGCAGCCGCAGCCCCAGGGTGCTGCCCAGGCGCCCCCGGGCGCCCCACAAGGCCCTCCTGGAGCGGCCCCTGGCCCGCCCCCTCCCGGACCCATCCTTCGGCCCCAGAACCCCGGGGCCAACCCCCAACTGCGGAGCCTCCTCCTCAACCCACCACCGCCCCAGACTGGGGTGCCCCCGCCTCAGGCCTCCCTCCACCACCTCCAGCCACCAGGGGCCCCTGCACTGCTGCCCCCACCGCACCAGGGCCTGGGGCAGCCCCAGCTGGGGCCCCCGCTCTTGCACCCACCGCCGCCGGCCCAGTCTTGGACTGCACAGCTTCCCCCGAGGGCTCCACTGCCAGGTCAGATGCTGCTCAGCGGGGGTCCCCGGGGCCCGGTCCCCCAGCCGGGCCTGCAGCCCAGCGTCATGGAGGACGACATCCTCATGGACCTCATCTGA

Related Sequences

bmy_06363T0 Protein

Length: 567 aa      View alignments
>bmy_06363T0
MVPGSEGPARAGGLVADVVFVIEGTANLGPYFEGLRKHYLLPAIEFMGGGGESCSLIAEGLSTALQLFDDFKKMREQIWGGWSSPAPPLYHQVPGNLSAAQVAAQNAVEAAKNQKAGLGPRFSPINPLQQAAPGVGPPYSQAQAPPLPPGPPGAPKPPPASQPSLVSTVAPGPGLAPPAQPGAPSMAGTVAPGGVSGPSPAQLGAPALGGQQSVSNKLLAWSGVLEWQEKPKPASVDANTKLTRSLPCQVYVNHGENLKTEQWPQKLIMQLIPQQLLTTLGPLFRNSRMVQFHFTNKDLDSLKGLYRIMGNGFAGCVHFPHTAPCEVRVLMLLYSSKKKIFMGLIPYDQSGFVNGIRQVITNHKQVQQQKLEQQRGMGAQQAPPGLGPILEDQARPSQNLLQLRPPQPQPQGTVGASTATGQPQPQGAAQAPPGAPQGPPGAAPGPPPPGPILRPQNPGANPQLRSLLLNPPPPQTGVPPPQASLHHLQPPGAPALLPPPHQGLGQPQLGPPLLHPPPPAQSWTAQLPPRAPLPGQMLLSGGPRGPVPQPGLQPSVMEDDILMDLI*