Sequence detailsbmy_06363 (Coding sequence)

Part of scaffold_243 (SequenceType object (1))

For more information consult the page for scaffold_243 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

MED25ENSTTRG00000014885 (Bottlenosed dolphin)

Gene Details

mediator complex subunit 25

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000014130, Bottlenosed dolphin)

Protein Percentage 81.98%
cDNA percentage 83.51%
Ka/Ks Ratio 0.35081 (Ka = 0.1126, Ks = 0.321)

BT.12647ENSBTAG00000008518 (Cow)

Gene Details

mediator of RNA polymerase II transcription subunit 25

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000040773, Cow)

Protein Percentage 90.04%
cDNA percentage 87.6%
Ka/Ks Ratio 0.1541 (Ka = 0.0701, Ks = 0.4549)

MED25 (Minke Whale)

Gene Details

mediator complex subunit 25

External Links

Gene match (Identifier: BACU011065, Minke Whale)

Protein Percentage 68.57%
cDNA percentage 75.18%
Ka/Ks Ratio 0.45055 (Ka = 0.221, Ks = 0.4906)

Additional orthologs identified in other species via the OPTIC pipeline.

MED25 (Human)   Med25 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1701 bp    Location:212816..198549   Strand:-
Raw sequence 
>bmy_06363
ATGGTCCCCGGGTCGGAGGGCCCGGCCCGCGCCGGGGGCCTCGTAGCTGACGTGGTGTTTGTAATTGAGGGCACGGCCAACCTGGGGCCCTACTTCGAGGGGCTCCGCAAGCACTACCTGCTCCCGGCCATCGAGTTCATGGGCGGGGGTGGCGAGAGCTGCAGCCTCATCGCAGAAGGCCTCAGCACAGCCCTGCAGCTGTTCGATGACTTCAAAAAGATGCGGGAGCAGATCTGGGGAGGGTGGTCCTCACCAGCCCCTCCCCTCTATCACCAGGTGCCCGGGAACCTGAGTGCAGCCCAGGTGGCTGCCCAGAACGCAGTGGAGGCTGCCAAGAACCAGAAGGCTGGGCTGGGCCCTCGCTTCTCGCCCATCAACCCCCTTCAGCAAGCCGCTCCAGGAGTGGGTCCCCCCTACAGCCAGGCCCAGGCCCCCCCGCTGCCCCCAGGGCCCCCCGGCGCCCCCAAGCCACCTCCTGCTTCCCAGCCCAGCCTGGTCTCCACTGTGGCCCCTGGCCCGGGCCTGGCCCCGCCTGCACAGCCCGGGGCACCATCCATGGCGGGCACCGTGGCCCCAGGCGGGGTGAGTGGCCCTTCTCCGGCCCAGCTCGGGGCCCCGGCCCTCGGCGGGCAGCAGTCAGTCTCCAACAAACTCCTGGCCTGGAGCGGGGTCCTCGAGTGGCAGGAGAAGCCCAAACCTGCCTCCGTGGACGCCAACACCAAGCTGACTCGGTCACTGCCTTGTCAGGTCTACGTGAATCACGGCGAGAACCTGAAAACAGAGCAGTGGCCCCAGAAGCTGATCATGCAGCTCATCCCCCAGCAGCTGCTGACCACCCTGGGCCCTTTGTTCCGGAACTCAAGGATGGTCCAGTTCCACTTCACCAACAAGGACCTGGACTCCCTCAAAGGCCTCTACCGCATCATGGGCAACGGCTTTGCGGGCTGCGTGCACTTCCCGCACACGGCGCCCTGCGAGGTGCGCGTGCTCATGCTCCTGTACTCGTCCAAGAAGAAGATCTTCATGGGCCTCATCCCCTACGACCAGAGCGGCTTCGTCAACGGCATCCGGCAGGTCATCACCAACCACAAGCAGGTCCAGCAGCAGAAGCTGGAGCAGCAGCGCGGGATGGGGGCACAGCAGGCACCCCCGGGGCTGGGCCCCATTCTGGAGGACCAGGCGAGGCCCTCGCAGAACCTGCTCCAGCTCCGCCCACCGCAGCCCCAGCCGCAGGGTACCGTGGGGGCCTCTACGGCCACGGGGCAGCCGCAGCCCCAGGGTGCTGCCCAGGCGCCCCCGGGCGCCCCACAAGGCCCTCCTGGAGCGGCCCCTGGCCCGCCCCCTCCCGGACCCATCCTTCGGCCCCAGAACCCCGGGGCCAACCCCCAACTGCGGAGCCTCCTCCTCAACCCACCACCGCCCCAGACTGGGGTGCCCCCGCCTCAGGCCTCCCTCCACCACCTCCAGCCACCAGGGGCCCCTGCACTGCTGCCCCCACCGCACCAGGGCCTGGGGCAGCCCCAGCTGGGGCCCCCGCTCTTGCACCCACCGCCGCCGGCCCAGTCTTGGACTGCACAGCTTCCCCCGAGGGCTCCACTGCCAGGTCAGATGCTGCTCAGCGGGGGTCCCCGGGGCCCGGTCCCCCAGCCGGGCCTGCAGCCCAGCGTCATGGAGGACGACATCCTCATGGACCTCATCTGA

Related Sequences

bmy_06363T0 SequenceType object (3)

Length: 567 aa      View alignments
>bmy_06363T0
MVPGSEGPARAGGLVADVVFVIEGTANLGPYFEGLRKHYLLPAIEFMGGGGESCSLIAEGLSTALQLFDDFKKMREQIWGGWSSPAPPLYHQVPGNLSAAQVAAQNAVEAAKNQKAGLGPRFSPINPLQQAAPGVGPPYSQAQAPPLPPGPPGAPKPPPASQPSLVSTVAPGPGLAPPAQPGAPSMAGTVAPGGVSGPSPAQLGAPALGGQQSVSNKLLAWSGVLEWQEKPKPASVDANTKLTRSLPCQVYVNHGENLKTEQWPQKLIMQLIPQQLLTTLGPLFRNSRMVQFHFTNKDLDSLKGLYRIMGNGFAGCVHFPHTAPCEVRVLMLLYSSKKKIFMGLIPYDQSGFVNGIRQVITNHKQVQQQKLEQQRGMGAQQAPPGLGPILEDQARPSQNLLQLRPPQPQPQGTVGASTATGQPQPQGAAQAPPGAPQGPPGAAPGPPPPGPILRPQNPGANPQLRSLLLNPPPPQTGVPPPQASLHHLQPPGAPALLPPPHQGLGQPQLGPPLLHPPPPAQSWTAQLPPRAPLPGQMLLSGGPRGPVPQPGLQPSVMEDDILMDLI*