Part of scaffold_243 (Scaffold)

For more information consult the page for scaffold_243 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

IRF3 ENSTTRG00000005531 (Bottlenosed dolphin)

Gene Details

interferon regulatory factor 3

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000005218, Bottlenosed dolphin)

Protein Percentage 83.05%
cDNA percentage 86.95%
Ka/Ks Ratio 0.57251 (Ka = 0.1233, Ks = 0.2154)

IRF3 ENSBTAG00000006633 (Cow)

Gene Details

Interferon regulatory factor 3

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000031815, Cow)

Protein Percentage 75.54%
cDNA percentage 81.53%
Ka/Ks Ratio 0.33968 (Ka = 0.1585, Ks = 0.4668)

IRF3  (Minke Whale)

Gene Details

interferon regulatory factor 3

External Links

Gene match (Identifier: BACU011071, Minke Whale)

Protein Percentage 87.35%
cDNA percentage 89.42%
Ka/Ks Ratio 0.41144 (Ka = 0.0901, Ks = 0.2189)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1374 bp    Location:340552..345960   Strand:+
>bmy_06371
ATGGGAACGCAAAAGCCTCGTATCCTGCCCTGGCTGGTATCTCAGCTGGATCAGGGGCAGCTGGAGGGCGTGGCCTGGCTGGATGAGAGCCGCACGCGCTTCCGCATCCCTTGGAAGCACGGCTTGCGGCAGGATGCCCAGCTGGAAGACTTCGGCATTTTCCAGGCCTGGGCTGAGGCCAGCGGTGCCTACACTCCTGGGAAGGATAAGCCCGACCTGCCCACCTGGAAGAGGAATTTCCGGTCTGCCCTGAATCGGAAGGAAGCGTTGCGTTTAGCAGAGGACCACAGCAAGGACCCCCACGACCCGCACAAGATCTATGAGTTTGTGACCTCAGGAGTTGGGGACTTATCTGAGCCAGACACCTCTCTTGACACCAATGGCAGATACAGTACCTCTGATATCCAGGAAGACATTCTGGAGAAGTTACTGAGTGACATGGACTTGGCCCCAGATGGAGGGCCCCCAAGTCTGACCATGGCCCCTGAGAACCCCCCTCAGCTCTTGCTGAGCCCCAACTTAGATGTCCCTGCTCCTTGCCCAAAGCCGGGACCCCCTGAAAACCCACTGAAGCAGCTGTTGGTGAGCGAGGAAGAGTGGGAGTTCGAGGTGACCGTCTTCTACCGGGGCTGCCAAGTCTTCCAGCAGACTGTCTTCTGCCCAGGGGGCCTGCGGCTGGTGGGATCAGAAGCAGGGGACAGGACACTGCCTGGACAGCCGATAAGACTGCCAGACCCCGCGGCGTCCCTGACAGACAGGGGCGTGACAGGCTACGTGCAGCGGGTGCTGAGCTGCCTGGGCGGGGGACTAGCTCTGTGGAGGGCCGGGCAGTGGCTCTGCGCCCAGAGGCTGGGGCATTGCCATGTGTACTGGGCCGTGGGCGAGGAACTCCTCCCCAGCAGTGGTCACAGGCCTGATGGTTCCTGGGCCCCCAGATCTGATTGCCTTCATCGAAGGAAGCAGACGCTCACCACGCTACACTCTCTGGTTCTGCGTGGGGCAGTCATGGCCCCAGGACCAACCATGGATCAAGAGGCTCGTGATGGTCAAGTCCCCTCGGAGAAACTACAACTTCTAAGAGTCTCTGCAAGTACCAGTTCCTCCTCAGGAGCTTCTGGTGTCCCTCCCACGGCCTCACCCCCAAAGCCTATTTTGCGTTCTCCCAACCACGTGGAAGTTGGTGGACTGCAAGTCCTAGCAGGCTGGGTTGTCCCCATGTGCCTCAGAGCCCTGCTAGACATGGCGCGGGTAGGGGGTGCCTCCTCCCTGGAGAACACTGTGGACCTTCACATTTCCAACAGCCACCCACTCTCCCTCACCTCGGACCAGTACAAGGCCTACCTCCAGGACCTGGTCGAGGACATGGACTTCTAG

Related Sequences

bmy_06371T0 Protein

Length: 458 aa      View alignments
>bmy_06371T0
MGTQKPRILPWLVSQLDQGQLEGVAWLDESRTRFRIPWKHGLRQDAQLEDFGIFQAWAEASGAYTPGKDKPDLPTWKRNFRSALNRKEALRLAEDHSKDPHDPHKIYEFVTSGVGDLSEPDTSLDTNGRYSTSDIQEDILEKLLSDMDLAPDGGPPSLTMAPENPPQLLLSPNLDVPAPCPKPGPPENPLKQLLVSEEEWEFEVTVFYRGCQVFQQTVFCPGGLRLVGSEAGDRTLPGQPIRLPDPAASLTDRGVTGYVQRVLSCLGGGLALWRAGQWLCAQRLGHCHVYWAVGEELLPSSGHRPDGSWAPRSDCLHRRKQTLTTLHSLVLRGAVMAPGPTMDQEARDGQVPSEKLQLLRVSASTSSSSGASGVPPTASPPKPILRSPNHVEVGGLQVLAGWVVPMCLRALLDMARVGGASSLENTVDLHISNSHPLSLTSDQYKAYLQDLVEDMDF*