Part of scaffold_243 (Scaffold)

For more information consult the page for scaffold_243 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

RCN3 ENSTTRG00000005508 (Bottlenosed dolphin)

Gene Details

reticulocalbin 3, EF-hand calcium binding domain

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000005194, Bottlenosed dolphin)

Protein Percentage 69.52%
cDNA percentage 69.52%
Ka/Ks Ratio 0.34216 (Ka = 0.0284, Ks = 0.083)

RCN3 ENSBTAG00000021799 (Cow)

Gene Details

Reticulocalbin-3

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000031823, Cow)

Protein Percentage 95.71%
cDNA percentage 93.65%
Ka/Ks Ratio 0.13593 (Ka = 0.0258, Ks = 0.1895)

RCN3  (Minke Whale)

Gene Details

reticulocalbin 3, EF-hand calcium binding domain

External Links

Gene match (Identifier: BACU018280, Minke Whale)

Protein Percentage 97.14%
cDNA percentage 96.98%
Ka/Ks Ratio 0.29675 (Ka = 0.0185, Ks = 0.0625)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 630 bp    Location:434191..423896   Strand:-
>bmy_06377
ATGATGTGGCGACCGTCACTTCTGCTGCTGCTGTTGCTGCTCAGGCGCGGAGCCCAGGGAAAGCCATCCCCTGACGCCGGCCCTCATGGCCAAGGGAGGGTGCACCACGCGGCCCCCCTGAGTGAGGCCCTTCATGATGACGCTCACGGSAACTTCCAATATGATCATGAGGCTTTTCTGGGACGAGAAGTGGCCAAGGAATTCGACCAACTCACCCCAGAGGAAAGCCAAGCCCGTCTGGGGCGCATCGTGGACCGCATGGACCGCGCCGGGGACGGGGACGGCTGGGTGTCGCTGGCCGAGCTCCGCGCGTGGATCGCACACACGCAGCAGCGGCACATACGGGACTCAGTGAGCGCGGCCTGGAACACGTACGACACAGACCGCGACGGGCGTGTGGGTTGGGAGGAGCTGCGCAACGCCACCTACGGCCACTATGAGCCGGGTGAAGAATTTCACGACGTGGAGGATGCAGAAACCTACAAGAAGATGCTGACTCGGGACGAGCGGCGTTTCCGGATGGCTGACCAGGATGGGGACTCAATGGCCACTCGGGAAGAGCTGACGGCCTTTTTGCATCCTGAGGAGTTCCCTCACATGCGGGACATCGTGATTGCTATTGATGTCAAA

Related Sequences

bmy_06377T0 Protein

Length: 210 aa      View alignments
>bmy_06377T0
MMWRPSLLLLLLLLRRGAQGKPSPDAGPHGQGRVHHAAPLSEALHDDAHGNFQYDHEAFLGREVAKEFDQLTPEESQARLGRIVDRMDRAGDGDGWVSLAELRAWIAHTQQRHIRDSVSAAWNTYDTDRDGRVGWEELRNATYGHYEPGEEFHDVEDAETYKKMLTRDERRFRMADQDGDSMATREELTAFLHPEEFPHMRDIVIAIDVK