Sequence details bmy_06394 (Coding sequence)

Part of scaffold_243 (Scaffold)

For more information consult the page for scaffold_243 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

HRC ENSTTRG00000017095 (Bottlenosed dolphin)

Gene Details

histidine rich calcium binding protein

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000016206, Bottlenosed dolphin)

Protein Percentage 94.18%
cDNA percentage 96.98%
Ka/Ks Ratio 0.89279 (Ka = 0.0305, Ks = 0.0342)

HRC ENSBTAG00000002853 (Cow)

Gene Details

sarcoplasmic reticulum histidine-rich calcium-binding protein precursor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000040660, Cow)

Protein Percentage 83.49%
cDNA percentage 88.84%
Ka/Ks Ratio 0.37455 (Ka = 0.0929, Ks = 0.2479)

Additional orthologs identified in other species via the OPTIC pipeline.

HRC (Human)   Hrc (Mouse)  

Genome Location

Sequence Coding sequence

Length: 1890 bp    Location:709594..713250   Strand:+
Raw sequence 
>bmy_06394
ATGGGCCACTGTGGGCCATGGCTGCACACTTCTCTCCTCTGGGCTGCAGTGGTCAGCCTGCTTCTCCCCACTGCCGTGACCCAGCAGCTGAGAGGGGCTGGGCCGGGGCCCAGCAACTGGAACAACAATGCAGGAGCTTCGGGGCCCTCAGAGGACGCGTCGGGCAAGTTTGGCCACCCCACGCACAGCCATAGAGGCCACGGAGATGAGAACAAGGATGTTTCCACGGAGAGTGGGCATCATTTCTGGGGCCACGGAGACCACAGAGAAGAGGACGAAGATGTCTCCAGAGAATCCCAAGACCATAGGTACCAAGGCCCCAAGGTGGGAGATGAGAACATCTCTGACGAGGAGGAATATACAGAGCACGCTCAGCAGGCCCGTGGGCACAGAAGCCATGGGAATGAAGACGCGGATGATTCAGCTGAGCACGGGCACCATTTCCCCAGCCACGGGAGCCATGGCCATCAAGATGAGGACGAAGACGAAGTTGTGTCCAGTGAGCATCACCATCATATCGTCAGGCATGTACACCGAGGCCATGGAGAAGAGGAGGATGAAGAAGAGGAAGAGGAGGATGTCTCCACTGAGTATGGACACCAGGTCCACAGACACCGAGACCATGGGAAGGAAAAGGATGAAGATGTCTCAGATGAACACCACCATCATGGCCCCAGCCACAGACACCGAGGCCGTGAAGAAGAAGAAGAAGAAGAAGAAGAAGATGATGATGATGTCTCCACTGAGTACATACACCAGACCCACAGGAGTCAAGGCCATGGGAAGGAAGACAATGAAGACGTCTCAGATGAACACCACCATCATATCCCTAGCCACAGACATCAAGGCCACAGAGACAAGGAAGATGAGGATGAGGATGTGTCCACTGAACACTGGCACCAGGTTCCCAGACATACCCACCATGGCCTTGGAGACGACGAGGAGGAGGACGAGGAGGAGATCACAGTCAAGTTCAGCCACCATGTTGCAAGCCACCAACCCCAAGGCCACAAGAGCGCTGAGGAGGAGGACTTCCCAGAGGAATATGAAAGAGCAGTTCCTGGCCATCACCACCACGGAGTCCCCAAGGAGGAAGATGAGGACATCTCTGCCAAGCTTGGCCACCAGGCTCCCAGCCACAGGCAGCAAAGCCACAGAGATAAAGGGACTGGCCACAGAGGGTCCATCAAAGAGGAGACTAGCCACCAGCCCCCAGAACACATGGGGGTAAAGGATAGAAGCCATTTAAGGGAGAGTGATTCTGAGGAGGAAGAGGAAGAGAGGGAAGAGGATCACAGCTCCCATGAAGAAGATGATGAAGGTTCAGAGGAGGGAGGAGAAGGCACCCACCATGGCAGCCTGGACCAGGAGGATGAGGAAGACAAGGAGGAAGGTCATGGCCTCAGCCTGAGCCAGGAGGAGGAGGAAGAAGAGAAGGATGACAGGAGGGAAGAGAGGGCTGAGGTTTGGGTCCCACTGAGCCAAGACCACCAGGAGGAAGAAGATGAGGAGGAGGGGCTGGAGGAGGATGAGCTCCCCTTCACCATCATCCCCAACCCATTGGCCAGGAGGGAGGTGTCTGGAGGTGCCTCCAGTGAAGAGGAGAGTGGTGAGGACATGGATCAGCAGGACGCCCAGGAGTACGGGAACTACCAGCCAGGGTCCCTTTGTGCCTACTGCTCCTTCTGCAATCGATGCACTGAATGTGAGAACTGTCACTGTGACGAGGAGAACATGGGAGAGCACTGCGACCAGTGCCAGCACTGCCAGTTCTGCTACCTCTGCCCGCTGGTCTGCGAAACTGTCTGCACTCCGGGAAGCTACGTCGACTATTTCTCCTCGTCCCTGTACCAAGCCCTGGCAGACATGCTGGAAACTCCGGAACTCTAA

Related Sequences

bmy_06394T0 Protein

Length: 630 aa      View alignments
>bmy_06394T0
MGHCGPWLHTSLLWAAVVSLLLPTAVTQQLRGAGPGPSNWNNNAGASGPSEDASGKFGHPTHSHRGHGDENKDVSTESGHHFWGHGDHREEDEDVSRESQDHRYQGPKVGDENISDEEEYTEHAQQARGHRSHGNEDADDSAEHGHHFPSHGSHGHQDEDEDEVVSSEHHHHIVRHVHRGHGEEEDEEEEEEDVSTEYGHQVHRHRDHGKEKDEDVSDEHHHHGPSHRHRGREEEEEEEEEDDDDVSTEYIHQTHRSQGHGKEDNEDVSDEHHHHIPSHRHQGHRDKEDEDEDVSTEHWHQVPRHTHHGLGDDEEEDEEEITVKFSHHVASHQPQGHKSAEEEDFPEEYERAVPGHHHHGVPKEEDEDISAKLGHQAPSHRQQSHRDKGTGHRGSIKEETSHQPPEHMGVKDRSHLRESDSEEEEEEREEDHSSHEEDDEGSEEGGEGTHHGSLDQEDEEDKEEGHGLSLSQEEEEEEKDDRREERAEVWVPLSQDHQEEEDEEEGLEEDELPFTIIPNPLARREVSGGASSEEESGEDMDQQDAQEYGNYQPGSLCAYCSFCNRCTECENCHCDEENMGEHCDQCQHCQFCYLCPLVCETVCTPGSYVDYFSSSLYQALADMLETPEL*