Sequence details bmy_06395 (Coding sequence)

Part of scaffold_243 (Scaffold)

For more information consult the page for scaffold_243 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PPFIA3 ENSTTRG00000017096 (Bottlenosed dolphin)

Gene Details

protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 3

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000016207, Bottlenosed dolphin)

Protein Percentage 99.72%
cDNA percentage 99.04%
Ka/Ks Ratio 0.02153 (Ka = 0.0008, Ks = 0.0379)

PPFIA3 ENSBTAG00000002844 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000003696, Cow)

Protein Percentage 99.44%
cDNA percentage 96.09%
Ka/Ks Ratio 0.01314 (Ka = 0.0024, Ks = 0.1852)

PPFIA3  (Minke Whale)

Gene Details

protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 3

External Links

Gene match (Identifier: BACU002204, Minke Whale)

Protein Percentage 99.72%
cDNA percentage 99.53%
Ka/Ks Ratio 0.05791 (Ka = 0.0008, Ks = 0.0145)

Additional orthologs identified in other species via the OPTIC pipeline.

PPFIA3 (Human)   Ppfia3 (Mouse)  

Genome Location

Sequence Coding sequence

Length: 3225 bp    Location:729561..713281   Strand:-
Raw sequence 
>bmy_06395
ATGATGTGCGAGGTGATGCCCACCATCAGCGAGGATGGCCGGCGGGGTTCGGCGCTGGGCCCGGACGAGGCGGGCGGCGAACTGGAGCGCCTCATGGTCACGATGCTCACGGAGCGCGAGCGCCTGCTCGAGACGCTACGCGAGGCGCAGGACGGACTGGCTACGGCGCAGTTGCGGCTGCGCGAGCTGGGCCACGAAAAGGACTCGCTGCAGCGCCAGCTCAGCATCGCGCTGCCCCAGGAGTTTGCGGCTCTGACGAAGGAGCTGAACTTGTGTCGGGAGCAGCTACTGGAACGGGAGGAAGAAATTGCGGAGCTGAAGGCAGAGCGGAACAATACTCGGCTTCTCCTAGAACACCTGGAGTGCCTGGTGTCCAGGCACGAGAGGTCACTGCGTATGACTGTGGTAAAGCGCCAGGCCCAGTCCCCGGGAGGGGTCTCTTCCGAGGTGGAGGTACTCAAGGCTCTAAAATCCCTCTTCGAGCACCACAAGGCCCTGGATGAGAAGGTCCGGGAGCGGCTGCGAATGGCACTGGAGCGGGTGGCAGTGCTAGAGGAAGAGTTGGAGCTGAGCAATCAGGAGACTCTGAGCCTTCGAGAGCAGCTGTCCAGGCGCCGGTCGGGGCTAGAGGAGCCCGGCAAGGATGGGGATGGGCAGACTCTTGCCAATGGCCTGGGTCCTGGCGGGGATTCGAACCGGCGCACGGCAGAGCTGGAGGAGGCCCTGGAGCGGCAGCGGGCGGAGGTGTGCCAGCTGCGGGAGCGCCTGGCGGTGTTGTGCCGCCAGATGAGCCAGCTGGAGGAGGAGCTGGGCACGGCCCACCGCGAGCTGGGTAAGGCCGAGGAAGCTAACGCCAAGCTCCAGCGCGACCTCAAGGAGGCGCTGGCGCAGCGGGAGGATATGGAGGAGCGGATCACAACGCTAGAGAAGCGCTACCTGAGTGCCCAGCGAGAGGCCACGTCTCTGCACGACGCCAACGACAAGCTGGAAAACGAGCTGGCCAGCAAGGAGTCGCTGTACCGGCAGAGTGAAGAGAAGAGCCGTCAGCTGGCCGAGTGGCTGGACGACGCCAAGCAGAAGCTGCAGCAGACGCTGCAGAAGGCGGAGACCTTGCCGGAGATAGAGGCCCAGCTGGCCCAGCGAGTGGCGGCGCTCAACAAGGCTGAGGAACGTCATGGGAATTTTGAGGAGAGGCTTCGGCAGCTGGAGGCCCAGTTGGAGGAGAAGAACCAGGAGCTGCAGCGGGCCCGACAGCGGGAGAAGATGAACGATGACCACAATAAGCGGCTGTCCGAGACAGTGGACAAGCTGCTGAGTGAGTCCAACGAACGGTTGCAGCTTCACCTCAAGGAGCGCATGGGGGCACTGGAGGAGAAGAACTCACTAAGCGAGGAGATCGCCAGCATGAAGAAGCTTCAGGATGAGCTGCTGCTCAACAAGGAGCAGCTCTTGGCGGAGATGGAGCGCATGCAGATGGAGATTGACCAGCTGCGGGGGAGGCCACCGTCCTCCTACTCCAGGTTAATCCAAGAGGAGAAGGAGACAACAGAACAGAGGGCAGAAGAGCTGGAGAGCCGGGTGTCTGGCTCGGGCCTGGACTCACTGGGCCGCTACCGCAGTAGCTGCTCACTGCCCCCCTCCCTCACCACTTCTACCCTTGCCAGCCCCTCCCCTCCCAGCTCTGGCCACTCAACACCCCGTCTGGCACCCCCTAGCCCTGCCCGTGAGGGCACCGACAAAGCTAATCATGCCCCCAAGGAGGAAGCTGGGGCTCCACGAATGGAGGGACCAGCAATCCCAGGAGACACCCCACCTCCCACTCCTCGTTCTGCCCGCCTTGAGAGAATGACCCAGGCCTTGGCACTGCAGGCGGGATCCCTGGAAGATGGAGGGCCCTCACGGGGAAGTGAGGGCACCCCAGATTCCCTGCACAAAGCTCCCAAGAAGAAGAGCATCAAGTCATCCATAGGCCGTCTCTTTGGCAAGAAGGAGAAGGGGCGAATGGGACCACCAGGTCGGGACAGCTCTTCTCTGGCTGGAACACCCTCAGACGAGACATTGGCCACTGACCCTCTGGGGCTAGCCAAGCTGACAGGCCCAGGAGACAAGGACCGAAGGAACAAGAGGAAGCATGAACTTCTGGAAGAGGCCTGCCGTCAGGGCCTGCCTTTTGCTGCCTGGGATGGGCCCACTGTGGTCTCCTGGCTAGAGCTGTGGGTAGGCATGCCTGCGTGGTATGTGGCCGCCTGCCGGGCCAATGTCAAGAGTGGTGCCATCATGGCCAACTTGTCAGACACGGAGATCCAGCGCGAGATCGGCATCAGCAACCCACTGCACCGGCTCAAGCTGCGCCTCGCTATCCAGGAGATGGTCTCACTCACCTCACCCTCTGCTCCTGCCTCCTCCCGCACTTCCACAGGAAACGTGTGGATGACACATGAAGAGATGGAGTCCCTTACCGCGACGACCAAGCCTATCCTGGCATATGGCGACATGAACCATGAATGGGTGGGGAACGACTGGCTGCCCAGCCTGGGGCTGCCCCAGTACCGCAGCTACTTCATGGAGTCGCTGGTGGATGCCCGAATGTTAGATCATCTTAACAAGAAGGAGCTCCGGGGCCAACTCAAGATGGTGGACAGCTTCCACAGGGTGAGTCTGCATTACGGGATCATGTGCCTGAAACGGCTCAACTATGACCGGAAGGACTTGGAGCGGAGGCGGGAAGAGAGTCAGACCCAGATCCGAGACGTGATGGTGTGGTCCAATGAGCGGGTCATGGGTTGGGTGTCCGGGCTGGGCCTGAAGGAATTCGCCACGAACCTCACGGAGAGCGGGGTGCACGGGGCGCTGCTCGCCCTGGACGAGACCTTCGACTACTCTGACCTGGCCTTGCTCCTGCAGATCCCCACACASAATGCACAGGCCCGGCAGCTCTTGGAGAAGGAATTCAGCAACCTCATCTCCTTGGGCACAGACAGGCGGCTGGATGAGGACAGTGCCAAGTCCTTCAGCCGCTCCCCATCCTGGCGGAAGATGTTCCGAGAGAAGGACCTCCGAGGCGTAACCCCTGACTCAGCTGAGATGTTGCCCCCCAACTTTCGTTCGGCCGCAGCAGGGGCCCTGGGCTCGCCGGGGCTTCCTCTCCGCAAGCTGCAGTCGGAAGGCCAGACTTCTGGGAGTTCCCGGGCAGACGGCGTTTCTGTCCGGACCTATTCCTGCTAG

Related Sequences

bmy_06395T0 Protein

Length: 1075 aa      View alignments
>bmy_06395T0
MMCEVMPTISEDGRRGSALGPDEAGGELERLMVTMLTERERLLETLREAQDGLATAQLRLRELGHEKDSLQRQLSIALPQEFAALTKELNLCREQLLEREEEIAELKAERNNTRLLLEHLECLVSRHERSLRMTVVKRQAQSPGGVSSEVEVLKALKSLFEHHKALDEKVRERLRMALERVAVLEEELELSNQETLSLREQLSRRRSGLEEPGKDGDGQTLANGLGPGGDSNRRTAELEEALERQRAEVCQLRERLAVLCRQMSQLEEELGTAHRELGKAEEANAKLQRDLKEALAQREDMEERITTLEKRYLSAQREATSLHDANDKLENELASKESLYRQSEEKSRQLAEWLDDAKQKLQQTLQKAETLPEIEAQLAQRVAALNKAEERHGNFEERLRQLEAQLEEKNQELQRARQREKMNDDHNKRLSETVDKLLSESNERLQLHLKERMGALEEKNSLSEEIASMKKLQDELLLNKEQLLAEMERMQMEIDQLRGRPPSSYSRLIQEEKETTEQRAEELESRVSGSGLDSLGRYRSSCSLPPSLTTSTLASPSPPSSGHSTPRLAPPSPAREGTDKANHAPKEEAGAPRMEGPAIPGDTPPPTPRSARLERMTQALALQAGSLEDGGPSRGSEGTPDSLHKAPKKKSIKSSIGRLFGKKEKGRMGPPGRDSSSLAGTPSDETLATDPLGLAKLTGPGDKDRRNKRKHELLEEACRQGLPFAAWDGPTVVSWLELWVGMPAWYVAACRANVKSGAIMANLSDTEIQREIGISNPLHRLKLRLAIQEMVSLTSPSAPASSRTSTGNVWMTHEEMESLTATTKPILAYGDMNHEWVGNDWLPSLGLPQYRSYFMESLVDARMLDHLNKKELRGQLKMVDSFHRVSLHYGIMCLKRLNYDRKDLERRREESQTQIRDVMVWSNERVMGWVSGLGLKEFATNLTESGVHGALLALDETFDYSDLALLLQIPTXNAQARQLLEKEFSNLISLGTDRRLDEDSAKSFSRSPSWRKMFREKDLRGVTPDSAEMLPPNFRSAAAGALGSPGLPLRKLQSEGQTSGSSRADGVSVRTYSC*