Part of scaffold_243 (Scaffold)

For more information consult the page for scaffold_243 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

LIN7B ENSTTRG00000017097 (Bottlenosed dolphin)

Gene Details

lin-7 homolog B (C. elegans)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000016208, Bottlenosed dolphin)

Protein Percentage 100.0%
cDNA percentage 98.54%
Ka/Ks Ratio 0.001 (Ka = 0.0001, Ks = 0.0663)

LIN7B ENSBTAG00000023415 (Cow)

Gene Details

Protein lin-7 homolog B

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000040675, Cow)

Protein Percentage 99.44%
cDNA percentage 96.61%
Ka/Ks Ratio 0.01461 (Ka = 0.0025, Ks = 0.1687)

LIN7B  (Minke Whale)

Gene Details

lin-7 homolog B (C. elegans)

External Links

Gene match (Identifier: BACU018311, Minke Whale)

Protein Percentage 94.22%
cDNA percentage 94.03%
Ka/Ks Ratio 0.24962 (Ka = 0.0411, Ks = 0.1646)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 552 bp    Location:738787..735332   Strand:-
>bmy_06396
ATGGCTGCGCTGGTGGAGCCGCTGGGGCTGGAGCGGGACGTGTCCCGGGCGGTGGAGCTCCTCGAGCGGCTCCAGCGCAGCGGGGAGCTGCCCCCGCAGAAGTTGCAGGCCCTCCAGCGAGTCCTGCAGAGCCGCTTCTGCTCTGCCATCCGGGAGGCCACGGTGGCCGCCTTCACAGCCAGTGAGGGCCACGCACATCCCAGGGTAGTGGAACTGCCCAAGACGGATGAGGGCCTGGGCTTCAACATCATGGGGGGCAAGGAGCAGAATTCGCCCATCTACATCTCCCGTGTCATCCCTGGAGGCGTGGCTGACCGCCACGGAGGCCTCAAGCGTGGGGACCAGCTGCTGTCAGTAAATGGTGTGAGCGTTGAGGGTGAACAGCATGAGAAGGCAGTGGAGTTGCTGAAGGCTGCCCAGGGCTCGGTGAAGCTGGTGGTGCGCTATACACCTCGAGTGCTGGAGGAGATGGAGGCCCGCTTTGAGAAGATGCGCTCTGCCCGGCGGCGCCAGCAACATCAGAGCTACTCGTCCTTGGAGTCTCGAGGCTGA

Related Sequences

bmy_06396T0 Protein

Length: 184 aa      View alignments
>bmy_06396T0
MAALVEPLGLERDVSRAVELLERLQRSGELPPQKLQALQRVLQSRFCSAIREATVAAFTASEGHAHPRVVELPKTDEGLGFNIMGGKEQNSPIYISRVIPGGVADRHGGLKRGDQLLSVNGVSVEGEQHEKAVELLKAAQGSVKLVVRYTPRVLEEMEARFEKMRSARRRQQHQSYSSLESRG*