Part of scaffold_243 (Scaffold)

For more information consult the page for scaffold_243 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SNRNP70 ENSTTRG00000017099 (Bottlenosed dolphin)

Gene Details

small nuclear ribonucleoprotein 70kDa (U1)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000016209, Bottlenosed dolphin)

Protein Percentage 99.53%
cDNA percentage 97.83%
Ka/Ks Ratio 0.02598 (Ka = 0.0021, Ks = 0.0811)

SNRNP70 ENSBTAG00000001996 (Cow)

Gene Details

U1 small nuclear ribonucleoprotein 70 kDa

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000002587, Cow)

Protein Percentage 99.07%
cDNA percentage 94.19%
Ka/Ks Ratio 0.01501 (Ka = 0.0041, Ks = 0.2757)

SNRNP70  (Minke Whale)

Gene Details

small nuclear ribonucleoprotein 70kDa (U1)

External Links

Gene match (Identifier: BACU018313, Minke Whale)

Protein Percentage 99.75%
cDNA percentage 99.59%
Ka/Ks Ratio 0.09644 (Ka = 0.0011, Ks = 0.0116)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1383 bp    Location:776540..746785   Strand:-
>bmy_06397
ATGCCGCAGGGTCACTCGAAGGGACCAAAGGACAGACAGACGATGGCCTTCCAGCCACCGGTGTCCTATGACACGGGACTTGGCAAGATGACCCAGTTCCTGCCACCCAACCTTCTGGCTCTCTTTGCTCCCCGTGACCCCATCCCGTACCTGCCACCCCTGGAGAAACTGCCACATGAAAAACACCACAATCAACCTTACTGTGGCATTGCGCCATACATCCGAGAGTTTGAGGACCCTCGAGATGCCCCTCCTCCAACTCGAGCAGAAACTCGGGAGGAGCGCATGGAGAGGAAGAGACGGGAAAAGATTGAGCGGCGACAGCAGGAAGTCGAGACAGAGCTAAAGATGTGGGACCCTCACAATGATCCCAATGCTCAGGGTGATGCCTTCAAGACTCTCTTTGTGGCTAGAGTGAACTATGACACGACAGAATCCAAGCTCCGGAGAGAGTTTGAGGTGTACGGACCCATCAAAAGAATACACATGGTCTACAGTAAGCGGTCAGGAAAGCCCCGGGGCTATGCCTTCATCGAGTATGAACACGAGCGAGACATGCATTCCGCTTACAAGCACGCAGATGGCAAGAAGATTGATGGCAGGAGAGTCCTCGTGGACGTGGAGAGGGGCCGCACCGTGAAGGGCTGGAGGCCCCGGCGGCTAGGAGGTGGCCTAGGCGGAACCCGGAGAGGGGGCGCTGACGTCAACATCCGGCACTCCGGCCGGGACGACACCTCCCGCTACGATGAGAGGGACCGGGACCGGGACCGCGAGCGGGAGCGCAGGGAGCGGAGCCGCGAGCGAGACAAGGAGCGAGAACGACGACGCTCCCGCTCTCGGGACCGGCGGCGGCGCTCGCGGAGTCGTGACAAGGAGGAGCGGCGGCGCTCCAGGGAGCGGAGCAAGGACAAGGACCGGGATCGGAAGCGGCGAAGCAGCCGGAGCCGTGAGCGGGCGCGGCGGGAGCGGGAACGCAAGGAGGAGCTGCGAGGCGGCGGCGGCGGTGGCGGCGACATGGCAGAGCCCTCCGAGGCCGGCGACGCGCCCCCTGATGATGGGCCTCCCGGGGAGCTGGGTCCTGACGGCCCCGACGGCCCGGAGGAGAAGGGCCGGGATCGGGATCGGGAGCGGCGTCGGAGCCACCGGAGCGAGCGGGAGCGGCGCCGGGACCGCGATCGCGAGCGCGATCGGGAGCACAAGAGGGGGGAGCGGGGTGGTGAACGGGGCAGGGATGAGGCCCGAGGTGGGGCGGGTGGCGGTGGCCAGGACAACGGGCTGGAGGGCCTGGGCAGCGACGGCCGAGACATGTACATGGAGTCCGAGGGAGGTGACGGGTACCTGGCTCCAGAGAACGGGTATTTGATGGAGGCTGCGCCAGAGTGA

Related Sequences

bmy_06397T0 Protein

Length: 461 aa      View alignments
>bmy_06397T0
MPQGHSKGPKDRQTMAFQPPVSYDTGLGKMTQFLPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYCGIAPYIREFEDPRDAPPPTRAETREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERGRTVKGWRPRRLGGGLGGTRRGGADVNIRHSGRDDTSRYDERDRDRDRERERRERSRERDKERERRRSRSRDRRRRSRSRDKEERRRSRERSKDKDRDRKRRSSRSRERARRERERKEELRGGGGGGGDMAEPSEAGDAPPDDGPPGELGPDGPDGPEEKGRDRDRERRRSHRSERERRRDRDRERDREHKRGERGGERGRDEARGGAGGGGQDNGLEGLGSDGRDMYMESEGGDGYLAPENGYLMEAAPE*