Sequence detailsbmy_06424 (Coding sequence)

Part of scaffold_243 (SequenceType object (1))

For more information consult the page for scaffold_243 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SPHK2ENSBTAG00000009872 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000013019, Cow)

Protein Percentage 91.48%
cDNA percentage 90.98%
Ka/Ks Ratio 0.21652 (Ka = 0.0506, Ks = 0.2339)

SPHK2 (Minke Whale)

Gene Details

sphingosine kinase 2

External Links

Gene match (Identifier: BACU002184, Minke Whale)

Protein Percentage 99.09%
cDNA percentage 98.63%
Ka/Ks Ratio 0.12295 (Ka = 0.0043, Ks = 0.0352)

Additional orthologs identified in other species via the OPTIC pipeline.

SPHK2 (Human)   Sphk2 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 2037 bp    Location:1104696..1096180   Strand:-
Raw sequence 
>bmy_06424
ATGGACACCTTGAAGCAGAGGAGCAGCAGGACCAGGCCCTGCCCCTGCTTCCCTCTGCCCACCATGGGGGTCCTGGACTCTGACTCCTACCCTCCTTCCTCCCCACAGAGGCCAGAGCAGGAGCTGACCTGGAGCTGGGGCCACAGGCCTAGGAGCGCCCTGGACAGGGTCAAGGCCATGGCCCCCCCACCGCCACCGCCATTGACCCCCAGCACCCCACTCCTGCATGGCGAGTTTGGCTCCTACCCAGCCCGAGGCCCACGCTTCGCCCTCACTCTCACACCACAAGCCCTGCACATACAGCGGCTGCGGCCAAAGCCTGAAGCCCGGCCCCGGGGTGGCCTGGTCCTGCTGGCTGAGGTCTCAGGCTGCTGCACCCTGCGGAGCCGAAGCCCCTCGGACCCAGCAGCCTACTTCTGCATCTACACCTACCCGAGGGGCCGGCGTGGGGGCCGGCGCAGAGCTGCACGCACCTTCCGGGCCGACGGGGCGGCCACCTACGAGGAGAACCGTGCTGAGGCCCAGCGCTGGGCCACCGGCCTCACGTGTCTGCTCCGCGGACTGCCACTACCTGGGGACGGGGAAATMACCCCCGACCTTCTGCCAAGGCCTCCCCGATTGCTCCTATTGGTCAATCCCTTTGGGGGGCGGGGCCTGGCCTGGCAGTGGTGTAAGAACCATGTGCTGCCCATGATCTCAGAAGCGGGGCTGTCCTTCAACCTCATCCAGACAGAACGACATAACCATGCCCGGGAGCTGGTCCAGGGGTTGAGCCTGAGCGAGTGGGATGGCATCGTCACCGTCTCCGGAGATGGGCTGCTGTATGAGGTGCTGAATGGACTCCTAGAACGCCCCGACTGGGAAGAGGCCGTGAAGACCCCCGTGGGCATCCTCCCCTGTGGCTCGGGCAACGCGCTGGCAGGAGCCGTGAACCAGCATGGGGGGTTTGAGCCGGCCCTGGGCATTGACCTGCTGCTCAACTGCTCCTTGCTGCTCTGCCGGGGTGGCAGCCACCCGCTGGACCTGCTCTCCGTCACTCTGGCCTCCGGCTCCCGCTGTTTCTCCTTCCTGTCTGTGGCCTGGGGCTTTGTGTCAGATGTGGACATCCAGAGCGAGCGCTTCAGGGCCCTGGGCAGTGCTCGCTTCACCCTGGGCACGGTCCTGGGCCTCGCCACACTGCACACCTACCGCGGCCGCCTCTCCTACCTCCCTGCCACGGTGGAGCCCGCCTCACCCGCCCCTGCCCATGGCCTGCCACGTGCCAAGTCAGAACTGACCCTAGCCCCCGGCCCAGCCCCACCCGTGGCCCACTCACCCCTGCACCGCTCAGTGTCTGACCTGCCCCTGCCCCTGCCTCAGCCTGCCCTGACCTCCCCTGGCTCACCTGAACCCATGCCCATCCTGTCCCTCAACGGTGGGGGCCCAGAGCTGGCCGGGGACTGGGGTGGGGCTGGGGATGCTCCACTGTCCCCAGACCCACTGCTGCCCTCGCCCCCTGGCTCCCCCAAGGCAGCTCAACTCTCACCCATCACCGAGGGGGCCTCAGAAATGCCAGCATCCTCTGGGYTCCCACCTCCCACCCCTGATGCCCGGGTAGCCATCTCTGCTGGGGGCCCACCTGACCACCTGCTCCCTCCTCTAGGCACTCCCCTACCCCCAGGCTGGGTGACAATGGAGGGGGACTTTGTGCTTATTTTGGCCATCTCACCCAGTCACCTGGGGGCTGACCTAGTGGCAGCGCCCCACGCGCGCTTTGACGACGGCCTGGTGCACCTGTGCTGGGTGCGCGGTGGCATCTCACGGGCGGCGCTCCTGCGCCTGTTTCTGGCCATGGAGCGCGGTAGCCACTTCAGCCTGGGCTGTCCGCAGCTGGGCTACGCTGCGGCTCGTGCCTTCCGCCTTGAGCCGCTCACGCCCCGCGGCGTGCTCACGGTGGACGGGGAAAAGGTGGAGTACGGGCCATTGCAGGCGCAAGTGCATCCCGGCCTCGGTACTCTGCTCACGGGTCCTTCAGGCTGCCCTGGGCGGGAGCCTTAA

Related Sequences

bmy_06424T0 SequenceType object (3)

Length: 679 aa      View alignments
>bmy_06424T0
MDTLKQRSSRTRPCPCFPLPTMGVLDSDSYPPSSPQRPEQELTWSWGHRPRSALDRVKAMAPPPPPPLTPSTPLLHGEFGSYPARGPRFALTLTPQALHIQRLRPKPEARPRGGLVLLAEVSGCCTLRSRSPSDPAAYFCIYTYPRGRRGGRRRAARTFRADGAATYEENRAEAQRWATGLTCLLRGLPLPGDGEITPDLLPRPPRLLLLVNPFGGRGLAWQWCKNHVLPMISEAGLSFNLIQTERHNHARELVQGLSLSEWDGIVTVSGDGLLYEVLNGLLERPDWEEAVKTPVGILPCGSGNALAGAVNQHGGFEPALGIDLLLNCSLLLCRGGSHPLDLLSVTLASGSRCFSFLSVAWGFVSDVDIQSERFRALGSARFTLGTVLGLATLHTYRGRLSYLPATVEPASPAPAHGLPRAKSELTLAPGPAPPVAHSPLHRSVSDLPLPLPQPALTSPGSPEPMPILSLNGGGPELAGDWGGAGDAPLSPDPLLPSPPGSPKAAQLSPITEGASEMPASSGXPPPTPDARVAISAGGPPDHLLPPLGTPLPPGWVTMEGDFVLILAISPSHLGADLVAAPHARFDDGLVHLCWVRGGISRAALLRLFLAMERGSHFSLGCPQLGYAAARAFRLEPLTPRGVLTVDGEKVEYGPLQAQVHPGLGTLLTGPSGCPGREP*