Sequence detailsbmy_06471 (Coding sequence)

Part of scaffold_241 (SequenceType object (1))

For more information consult the page for scaffold_241 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

MTMR1ENSTTRG00000002239 (Bottlenosed dolphin)

Gene Details

myotubularin related protein 1

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000002100, Bottlenosed dolphin)

Protein Percentage 92.95%
cDNA percentage 92.81%
Ka/Ks Ratio 0.17174 (Ka = 0.0055, Ks = 0.0319)

MTMR1ENSBTAG00000009657 (Cow)

Gene Details

myotubularin-related protein 1

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000012726, Cow)

Protein Percentage 97.19%
cDNA percentage 94.68%
Ka/Ks Ratio 0.08289 (Ka = 0.0148, Ks = 0.179)

MTMR1 (Minke Whale)

Gene Details

myotubularin related protein 1

External Links

Gene match (Identifier: BACU007748, Minke Whale)

Protein Percentage 98.07%
cDNA percentage 97.66%
Ka/Ks Ratio 0.27424 (Ka = 0.0146, Ks = 0.0534)

Additional orthologs identified in other species via the OPTIC pipeline.

MTMR1 (Human)   Mtmr1 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1929 bp    Location:904859..857392   Strand:-
Raw sequence 
>bmy_06471
ATGGAAGAGGCACCCCTTTTCCCAGGAGAATCAATCAAGGCCATTGTGAAAGATGTCATGTATATCTGCCCATTTGTGGGAGCAGTGAGTGGCACCCTGACAGTGACAGACTTTAAGATGTACTTCAAGAATGTAGAGAGAGACCCGCATTTCGTCCTCGATGTCCCCCTGGGAGTGATCAGCAGAGTTGAGAAGATTGGAGCGCAGAGCCATGGAGACAACTCTTGTGGCATAGAGATCATGTGCAAGGATATGAGGAACTTGCGACTTGCTTATAAACAAGAAGAACAGAGTAAACTAGGGATATTTGAAAACCTCAACAAATACGCATTTCCTCTTTCCAATGGGCAGACACTCTTTGCATTCAACTATAAAGAAAAATTTCCAGTGAATGGATGGAAAGTTTATGATCCAGTATCTGAATATAAAAGACAGGGCTTGCCAAATGAGAGTTGGAAAATATCCAAAGTAAACAGTAATTATGAGCTCTGTGACACCTACCCCGCCATCATTGTCGTGCCAACTAGTGTAAAAGATGATGACCTTTCAAAAGTGGCAGCGTTTCGAGCAAAAGGCAGAATCCCGGTGTTGTCATGGATTCATCCAGAAAGTCAGGCAACGATTACCCGTTGCAGCCAGCCACTTGTGGGTCCCAATGATAAACGCTGCAAGGAAGATGAGAAGTACTTGCAAACGATAATGGATGCTAATGCGCAGGCTCACAAACTCATCATCTTTGATGCCCGGCAAAACAAGGTCGCCAGCACCAACAAGGCAAAGGGTGGGGGCTATGAAAGTGAAAGTGCATACCCAAACGCAGAACTCGTGTTCCTGGAGATCCACAACATTCACGTGATGAGAGAGTCGCTGCGAAAACTGAAGGAGATCGCGTACCCGGCCATCGACGAGGCACGGTGGCTGTCCAACGTGGACGGGACGCACTGGCTGGAGTACATTCGGATGCTTCTTGCTGGGGCAGTAAGAATTGCTGATAAAATAGAATCTGGGAAAACCTCGGTGGTGGTGCACTGCAGTGACGGTTGGGACCGAACATCCCAGCTGACGTCTCTGGCCATGCTGATGTTGGACAGTTATTACCGCACCGTTAAAGGATTCGAGGCTCTCATAGAAAAGGAGTGGATAAGCTTTGGACATAGGTTTGCACTGCGAGTGGGCCATGGCAATGACAACCATGCAGATGCTGACCGATCCCCTATATTTCTTCAGTTTATTGACTGTGTTTGGCAAATGACGAGACAGTTTCCTTCAGCATTCGAGTTTAATGAACTATTCTTGATTACAATTTTGGATCACCTTTATAGCTGTCTCTTTGGGACTTTCTTGTGCAACTGTGAACAGCAGCGACTGAAAGAGGATGTATATACAAAGACTATATCTTTATGGTCTTATATCAATAGCCAGCTGGATGAATTTTCTAATCCCTTCTTTGTGAATTATGAAAACCACGTCCTATATCCTGTTACTAGTCTGAGTCATTTGGAATTATGGGTAAACTATTACGTGCGATGGAATCCACGAATGAGGCCTCAGATGCAGAAACGGAGGTGCAGGGGGTGTGCGGGGCCACGGCCATCGATGCTGCTGGGTGGTGGCCTCAGCCGAGGGAGCACCCGCTGGGGAGGACGACCAGGCCACGGCTCGCGGGGAGGGGCCCCTGTGCCCGCGGCGGTGAGGGCGAGGGGCGGGAGGCGGGGACCGGGCTGGGGAGCGGCGGGAGGCGGCGCTGACCCGCGTCTCTGCCCGCAGACGCCCATCCACCAGAACCTCAAGGAGCTGCTGGCCGTCCGCGCGGAGCTGCAGAAGCGGGTGGAGGACCTGCAGCGGGAGGTGGCCGCGCGCGCCTCGGCCTCGTCTGAGCGGGGCTCCTCGCCGTCACACTCGGTCACGCCCGTGCACACGTCGGTCTGA

Related Sequences

bmy_06471T0 SequenceType object (3)

Length: 643 aa      View alignments
>bmy_06471T0
MEEAPLFPGESIKAIVKDVMYICPFVGAVSGTLTVTDFKMYFKNVERDPHFVLDVPLGVISRVEKIGAQSHGDNSCGIEIMCKDMRNLRLAYKQEEQSKLGIFENLNKYAFPLSNGQTLFAFNYKEKFPVNGWKVYDPVSEYKRQGLPNESWKISKVNSNYELCDTYPAIIVVPTSVKDDDLSKVAAFRAKGRIPVLSWIHPESQATITRCSQPLVGPNDKRCKEDEKYLQTIMDANAQAHKLIIFDARQNKVASTNKAKGGGYESESAYPNAELVFLEIHNIHVMRESLRKLKEIAYPAIDEARWLSNVDGTHWLEYIRMLLAGAVRIADKIESGKTSVVVHCSDGWDRTSQLTSLAMLMLDSYYRTVKGFEALIEKEWISFGHRFALRVGHGNDNHADADRSPIFLQFIDCVWQMTRQFPSAFEFNELFLITILDHLYSCLFGTFLCNCEQQRLKEDVYTKTISLWSYINSQLDEFSNPFFVNYENHVLYPVTSLSHLELWVNYYVRWNPRMRPQMQKRRCRGCAGPRPSMLLGGGLSRGSTRWGGRPGHGSRGGAPVPAAVRARGGRRGPGWGAAGGGADPRLCPQTPIHQNLKELLAVRAELQKRVEDLQREVAARASASSERGSSPSHSVTPVHTSV*