Sequence details bmy_06475 (Coding sequence)

Part of scaffold_247 (Scaffold)

For more information consult the page for scaffold_247 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

LSM5 ENSTTRG00000004237 (Bottlenosed dolphin)

Gene Details

LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000003974, Bottlenosed dolphin)

Protein Percentage 52.22%
cDNA percentage 63.7%
Ka/Ks Ratio 1.06066 (Ka = 0.5413, Ks = 0.5103)

LSM5 ENSBTAG00000002332 (Cow)

Gene Details

U6 snRNA-associated Sm-like protein LSm5

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000003010, Cow)

Protein Percentage 52.22%
cDNA percentage 62.22%
Ka/Ks Ratio 0.81125 (Ka = 0.5436, Ks = 0.67)

Additional orthologs identified in other species via the OPTIC pipeline.

LSM5 (Human)   Lsm5 (Mouse)  

Genome Location

Sequence Coding sequence

Length: 297 bp    Location:161344..151682   Strand:-
Raw sequence 
>bmy_06475
ATGCGGCGGCAGCCGCCGATTGGTCGAGCCTGTCCGGGCTGCCGGAAAAAGCGGAAGCGCGCTCTTTCAAACTCGCCTTCCCAAGTTGGAGAGACGCAGACCACTTCCGGCGTAGCCATGGCGGCTAACGCTACAACCAACCCGTCGCAGCTTCTTCCTCTAGATATGGTACTGGAAGATGTCACTGAGTTTGAAATCACGCCAGAAGGAAGAAGAATTACTAAATTAGATCAAATTTTGCTAAATGGAAATAACATAACAATGCTGGTTCCTGGAGGAGAAGGACCTGAAGTATGA

Related Sequences

bmy_06475T0 Protein

Length: 99 aa      View alignments
>bmy_06475T0
MRRQPPIGRACPGCRKKRKRALSNSPSQVGETQTTSGVAMAANATTNPSQLLPLDMVLEDVTEFEITPEGRRITKLDQILLNGNNITMLVPGGEGPEV*