Sequence detailsbmy_06476 (Coding sequence)

Part of scaffold_247 (SequenceType object (1))

For more information consult the page for scaffold_247 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

AVL9ENSTTRG00000004244 (Bottlenosed dolphin)

Gene Details

AVL9 homolog (S. cerevisiase)

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000003993, Bottlenosed dolphin)

Protein Percentage 97.06%
cDNA percentage 97.22%
Ka/Ks Ratio 0.21214 (Ka = 0.0115, Ks = 0.0542)

AVL9ENSBTAG00000003114 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000004049, Cow)

Protein Percentage 96.37%
cDNA percentage 94.3%
Ka/Ks Ratio 0.11574 (Ka = 0.0196, Ks = 0.1695)

AVL9 (Minke Whale)

Gene Details

AVL9 homolog (S. cerevisiase)

External Links

Gene match (Identifier: BACU005826, Minke Whale)

Protein Percentage 92.79%
cDNA percentage 94.02%
Ka/Ks Ratio 0.64314 (Ka = 0.0553, Ks = 0.0859)

Additional orthologs identified in other species via the OPTIC pipeline.

AVL9 (Human)   Avl9 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1839 bp    Location:161582..224239   Strand:+
Raw sequence 
>bmy_06476
ATGGAGAAGAACGGGCGGGGCGGCGATAGCGCTCCCCGGGGGCCCGTACTGCACATCGCGGTGGTCGGCTTTCATCACAAGAAGGGCTGCCAGGTTGAATTCTCTTACCCGCCCCTGATTCCAGGAGATGGACATGACAGTCACACTCTACCTGAAGAATGGAAGTATTTGCCCTTCCTTGCCTTGCCAGATGGCGCACACAACTACCAAGAAGATACTGTGTTTTTTCACTTGCCACCCAGAAATGGAAATGGAGCCACTGTATATGGTATCTCTTGCTATCGACAAATTGAAGCCAAGGCATTGAAAGTACGGCAAGCAGATATCACCAGAGAGACCGTTCAGAAAAGTGTCTGTGTTCTAAGCAAGCTGCCTCTCTATGGCTTACTTCAAGCAAAACTTCAACTCATTACGCATGCATATTTTGAAGAGAAGGATTTTTCCCAAATTTCCATTCTAAAGGAGCTCTATGAACATATGAATAGTTCCCTGGGAGGAACTTCATTAGAAGGATCCCAGGTATATCTTGGTCTATCTCCTCGAGATCTTGTACTTCATTTTCGACACAAGGTCCTAATCCTGTTTAAACTAATTCTTCTTGAAAAAAAGGTGAGATTTGAATGCATGATTGAACATGGTCTCAGTGATAGTTCTCAGTATAGACCCCGAAAGAGTATGTCTGAAGATGTTGGGCTTCAAGAAAGTAATCCCCCTGAAGATGAATTTGTTTCTATGCCTGCTCCTGACATTTCAAATACCAACTTGGGAACTGTCGAGAAAATCATGATGGGAAACCATGGAAGAGATGCTGCCATCAAGACTGAAGAACCTTTGTTCCAGGTAGACGATGAGAACAGTGAAGGACAGGAACCCAATGACAGCAATCAATATTTGAAACCTCCTTCTCGCCCATCTCCAGAGTCTTCAGAAAGTGACTGGGAGACCTTGGATCCTAGTGTCTTAGAGGACTCCTCCTTGAAAGAAAGAGAACAGGTGGGATCGGAACAGACAGACTCATTTCCAAAGGAGTCTTTGCCCTCAGACAGTCCTCCGATTACTGTACAACCTCAAGCTAACACAGGCCAGGTAGTCCTGATACCAGGGCTAATTTCCGGTTTGGAAGAGGACCAGTATGGCATGCCCCTGGCCATCTTCACAAAGGGGTATCTGTGTTTGCCTTATATGGCATTGCAGCAGCATCATCTTCTCTCTGATGTCACCATTCGAGGATTTGTTGCTGGAGCTACTAACATCCTTTTTCGACAACAGAAACACCTCAGTGATGCCATTGTGGAAGTAGAAGAAGCTCTGATCCAGATCCATGATCCAGAACTCAGGAAGCTGCTTAACCCAACCACTGCAGACCTAAGGTTCTCAGATTACCTAGTGAGGCATGTGACCGAGAACCGGGATGATGTCTTCCTGGATGGCACGGGCTGGGAGGGAGGTGACGAATGGATTCGAGCCCAGTTTGCAGTCTACATCCATGCACTGCTGGCYGCCACACTGCAGTTAGATAATGAAAAGATCTTATCAGACTATGGGACGACCTTTGTTACAGCATGGAAGAACACTCACAACTACAGGGTCTGGAACAGCAACAAGCATCCAGCACTTGCAGAAATAAATCCGAATTCTGTTCAAAACAGTGAACGTGGCAAAAAACTTGGAAACGTCATGGTCACAACGAGTCGGAATGTTGTGCAAACAGGAAAAGCTGTTGGCCAGTCAGTTGGAGGAGCTTTTTCCAGTGCAAAGACAGCCATGTCTTCATGGCTTTCTACTTTCACCAGTTCCACTCCACAGAGTCTCACTGAGCTGCCTGACGGGAAACCCTGA

Related Sequences

bmy_06476T0 SequenceType object (3)

Length: 613 aa      View alignments
>bmy_06476T0
MEKNGRGGDSAPRGPVLHIAVVGFHHKKGCQVEFSYPPLIPGDGHDSHTLPEEWKYLPFLALPDGAHNYQEDTVFFHLPPRNGNGATVYGISCYRQIEAKALKVRQADITRETVQKSVCVLSKLPLYGLLQAKLQLITHAYFEEKDFSQISILKELYEHMNSSLGGTSLEGSQVYLGLSPRDLVLHFRHKVLILFKLILLEKKVRFECMIEHGLSDSSQYRPRKSMSEDVGLQESNPPEDEFVSMPAPDISNTNLGTVEKIMMGNHGRDAAIKTEEPLFQVDDENSEGQEPNDSNQYLKPPSRPSPESSESDWETLDPSVLEDSSLKEREQVGSEQTDSFPKESLPSDSPPITVQPQANTGQVVLIPGLISGLEEDQYGMPLAIFTKGYLCLPYMALQQHHLLSDVTIRGFVAGATNILFRQQKHLSDAIVEVEEALIQIHDPELRKLLNPTTADLRFSDYLVRHVTENRDDVFLDGTGWEGGDEWIRAQFAVYIHALLAATLQLDNEKILSDYGTTFVTAWKNTHNYRVWNSNKHPALAEINPNSVQNSERGKKLGNVMVTTSRNVVQTGKAVGQSVGGAFSSAKTAMSSWLSTFTSSTPQSLTELPDGKP*