Sequence detailsbmy_06552 (Coding sequence)

Part of scaffold_252 (SequenceType object (1))

For more information consult the page for scaffold_252 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

DDX5ENSTTRG00000008793 (Bottlenosed dolphin)

Gene Details

DEAD (Asp-Glu-Ala-Asp) box helicase 5

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000008362, Bottlenosed dolphin)

Protein Percentage 98.36%
cDNA percentage 98.05%
Ka/Ks Ratio 0.25309 (Ka = 0.012, Ks = 0.0476)

BT.64934ENSBTAG00000018423 (Cow)

Gene Details

probable ATP-dependent RNA helicase DDX5

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000024514, Cow)

Protein Percentage 98.54%
cDNA percentage 95.92%
Ka/Ks Ratio 0.07195 (Ka = 0.011, Ks = 0.1524)

Additional orthologs identified in other species via the OPTIC pipeline.

DDX5 (Human)   Ddx5 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1809 bp    Location:453630..444925   Strand:-
Raw sequence 
>bmy_06552
ATGGCGGATTCCGGAACGCCGGCTGGCCACCGGTTCTTGTCATCGCCGTTCTTCCGCCGCTGCCGCCCCCGCAAGGCTTCGCCGTCGCCGGAGCCACTTCCAGCGACTCGCCGCACTCGATTCTCTCCGCTTCGCTTCCCGCCAACCGCAACCATTGACGCCATGTCGGGTTATTCGAGTGACCGAGACCGCGGCCGGGATCGAGGGTTTGGTGCCCCTCGATTTGGAGGAAGTAGGGCAGGGCCCTTATCTGGAAAGAAGTTTGGAAACCCTGGGGAGAAACTGGTTAAAAAGAAGTGGAATCTTGATGAGCTGCCCAAATTTGAGAAGAATTTTTATCAGGAACACCCTGATTTGGCTAGGCGTACAGCACAAGAGGTAGAGACATACAGAAGAAGCAAGGAAATTACAGTCAGAGGTCACAACTGTCCAAAGCCAGTCCTGAATTTTTATGAAGCGAACTTCCCTGCAAACGTCATGGATGTGATTGCAAGGCAGAACTTTACTGAACCCACAGCTATTCAAGCTCAGGGATGGCCAGTTGCTCTAAGTGGATTGGATATGGTTGGGGTAGCACAAACTGGATCTGGGAAGACATTGTCTTATTTGCTGCCTGCCATTGTCCACATCAATCATCAGCCATTTCTAGAGAGAGGTGATGGGCCTATTTGCTTGGTGCTGGCACCAACTCGGGAACTGGCCCAACAGGTACAGCAAGTAGCTGCTGAATACTGTAGAGCATGTCGCTTGAAGTCCACTTGTATTTATGGTGGTGCTCCCAAGGGACCACAGATACGTGATTTGGAGAGAGGTGTGGAAATCTGTATTGCAACACCTGGAAGACTGATTGACTTCTTAGAATGTGGGAAAACCAATCTAAGAAGAACCACCTACCTTGTCCTTGATGAAGCAGATAGAATGCTTGATATGGGATTCGAGCCCCAAATAAGGAAGATTGTGGATCAGATAAGAAAAAAAGATTCCTGTGGTTTATTTAAGGACCAAAGGCTTATTCGTTTAATGGAAGAGATCATGAGTGAGAAGGAGAATAAAACCATTGTTTTCGTTGAAACCAAAAGAAGATGTGATGAACTCACTAGAAAAATGAGGAGAGATGGGTGGCCTGCCATGGGTATCCATGGTGACAAGAGTCAACAGGAGCGTGACTGGGTTCTAAATGATGTGGAAGATGTGAAATTTGTCATCAATTATGACTACCCTAACTCCTCAGAGGATTATATTCATCGAATTGGAAGAACTGCTCGCAGTACCAAAACAGGCACAGCATACACTTTCTTTACACCTAATAACATAAAGCAAGTGAGCGACCTTATCTCTGTGCTTCGTGAAGCTAATCAAGCAATTAATCCCAAATTGCTTCAGTTGGTCGAAGACAGAGGTTCAGGTCGTTCCAGGGGTAGAGGAGGCATGAAGGATGACCGTCGGGACAGATACTCTGCGGGCAAAAGGGGTGGATTTAATACATTTAGAGACAGGGAAAATTATGACCGAGGTTACTCTAGTCTGCTTAAGAGAGATTTTGGGGCAAAAACTCAAAATGGTGTTTACAGTGCTGCAAATTACACCAATGGGAGCTTTGGAAGTAATTTTGTGTCTGCTGGTATACAGACCAGTTTTAGGACTGGTAATCCAACAGGGACTTACCAGAATGGTTATGACAGCACTCAGCAATATGGAAGTAATGTTCCAAATATGCACAATGGTATGAACCAACAGGCATATGCATATCCTGCTACTGCAGCTGCGCCTATGATTGGTTATCCAATGCCAACAGGATATTCTCAATAA

Related Sequences

bmy_06552T0 SequenceType object (3)

Length: 603 aa      View alignments
>bmy_06552T0
MADSGTPAGHRFLSSPFFRRCRPRKASPSPEPLPATRRTRFSPLRFPPTATIDAMSGYSSDRDRGRDRGFGAPRFGGSRAGPLSGKKFGNPGEKLVKKKWNLDELPKFEKNFYQEHPDLARRTAQEVETYRRSKEITVRGHNCPKPVLNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLERGDGPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQIRKKDSCGLFKDQRLIRLMEEIMSEKENKTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDLISVLREANQAINPKLLQLVEDRGSGRSRGRGGMKDDRRDRYSAGKRGGFNTFRDRENYDRGYSSLLKRDFGAKTQNGVYSAANYTNGSFGSNFVSAGIQTSFRTGNPTGTYQNGYDSTQQYGSNVPNMHNGMNQQAYAYPATAAAPMIGYPMPTGYSQ*