Sequence details bmy_06570 (Coding sequence)

Part of scaffold_245 (Scaffold)

For more information consult the page for scaffold_245 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SIX5 ENSTTRG00000014303 (Bottlenosed dolphin)

Gene Details

SIX homeobox 5

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000013557, Bottlenosed dolphin)

Protein Percentage 94.57%
cDNA percentage 95.62%
Ka/Ks Ratio 0.35924 (Ka = 0.0324, Ks = 0.0901)

BT.26127 ENSBTAG00000013346 (Cow)

Gene Details

homeobox protein SIX5

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000017753, Cow)

Protein Percentage 95.34%
cDNA percentage 93.31%
Ka/Ks Ratio 0.09044 (Ka = 0.0227, Ks = 0.2505)

Additional orthologs identified in other species via the OPTIC pipeline.

SIX5 (Human)   Six5 (Mouse)  

Genome Location

Sequence Coding sequence

Length: 2148 bp    Location:161756..157674   Strand:-
Raw sequence 
>bmy_06570
ATGGCTACCTTGCCTGCGGAGCCGAGCGCGGGGCCGGCGGCTGGGGGGGAGGCGGTGGCGGCGGCGGCGGCGGCGACCGAAGAGGAGGAGGAGGAAGCGCGCCAGCTTCTGCAGACTTTGCAGGCGGCCGAGGGTGAGGCAGCGGCGGCCCCCGAGGCCGCTGCCGAGCCGCCCACGGGCCTCCGCTTCTCGCCAGAGCAGGTGGCGTGCGTGTGCGAGGCGCTGCTACAGGCGGGCCACGCCGGCCGCTTGAGCCGTTTCCTGGGCGCACTGCCCCCGGCCGAGCGCCTACGTGGCAGCGATCCGGTGCTGCGCGCTCGGGCCCTGGTGGCCTTCCAGCGGGGCGAGTACGCCGAGCTCTACCGGCTGCTCGAGAGCCGTCCCTTCCCCGCCGCCCACCACGCGTTTCTGCAGGACCTCTACCTGCGCGCGCGCTACCACGAGGCCGAACGGGCCCGCGGCCGCGCGCTGGGCGCGGTGGACAAGTACCGTCTGCGCAAGAAGTTCCCGCTGCCCAAGACCATCTGGGACGGCGAAGAGACCGTCTACTGCTTCAAGGAGCGGTCCCGCGCCGCGCTCAAGGCCTGCTATCGCGGCAACCGCTACCCCACGCCGGACGAGAAGCGCCGCCTGGCCACGCTCACCGGCCTCTCGCTCACGCAGGTTAGCAACTGGTTCAAGAACCGACGACAGCGCGACCGGACCGGGGGCGGCAGCGGCGCGCCCTGCAAGAGCGAATCTGATGGGAACCCCACTACGGAGGACGAGTCCAGCCGCAGCCCTGAGGACCTGGAGAGGGGGGCGGCTCCAGTGGCGGCCGAGGCCCCCGCCCAGGGCTCCATATTCCTGGCCGGGGCCGCCCCTCCCGCGCCGTGCCCCGCCTCCTCCTCCATCCTGGTGAACGGGAGCTTCCTGGCCGCCGGCAGCTCTCCAGCGGTGCTCCTCAATGGGAGCCCCGTCATCATCAACAGCCTGGCCCTGGGCGAGGCCTCCAGCCTGGGCCCCCTGCTGCTCGGCGGGGGCGGGGGCGCCCCTGCACCGCAGCCCAGCCCCCAGGGGGCCAGCGAGGGCAAGACCTCCCTGGTCCTGGACCCTCAGACTGGGGAGGTTCGCCTGGAAGAGGCTCAGCCTGAAGCCCCTGAGACCAAGGGGGCCCAGGTGGCTGCTTCAGGGCCGCCTGGAGAGGAGGTCCCAGGGCCTCTGCCCCAAGTGGTGCCTGGCCCCCCGCCGGCTGCCACCTTTCCTCTGCCCCCAGGACCAGTGACTTCCGTGGCTGCTCCACAAGTGGTGCCACTTTCCCCACCCCCTGGCTACCCTGCCGGCCTGGGCCCCACCTCCCCACTGTTGAACCTGCCCCAGGTGGTGCCCACCTCCCAGGTGGTGACCTTGCCTCAGGCTGTGGGGCCACTGCAGCTGTTGGCAGCTGGGCCAGGCAGCCCCGTGAAGGTGGCAGCTGCCCCGGGCCCTGCCAACGTGCACCTGATAAACTCTGGGGTGGGCGTGACTGCCCTGCAGCTGCCTTCGGCCACTGCCCCAGGAAACTTCCTGCTGGCCAACCCCGTGTCTGGCAGCCCCATCGTGACAGGTGTGGCCGTGCAGCAGGGCAAGATCATCCTCACCGCCACCTTCCCCACCAGCATGCTGGTCTCCCAGGTCCTGTCGCCGGCCCCCAGCCTGGCCCCCAGCCTGGCCCTGCCCCTGAAGCCAGACGCGGCCATCTCAGTCCCTGAAGGAGCCCTCCCGGTGGCCCCCAGCCCCGCTCTGCCGGAGGCCCACGCCTTAGGCGCACTGTCTGCGCAGCCGCCCCCCGCCCCGGCCGCCACCAGCCTGCCCTTCTCCCCAGACTCCTCCGGCCTCCTGCCCGGCTTCCAGGCGCCCCCGCCCGAGGGGCTCCTGCTGTCGCCCGCGGCCGTGCCCATCTGGCCAGCCGGGCTGGAACTGAGCGCCGGCACCGAGGGGCTGCTAGAGGCGGAGAAGGGGCTGGGGACACAGGCCCCCCATACAGTGCTGAGGCTGCCGGACCCCGACCCCGAGGGGCTGCTCCTGGGGGCCACGGCGGGGGGCGAGGTTGACGAGGGGCTGGAAGCGGAGACCAAGGTCCTGACCCAGTTACAGTCGGTGCCTGTGGAAGAGCCCTTGGAACTGTGA

Related Sequences

bmy_06570T0 Protein

Length: 716 aa      View alignments
>bmy_06570T0
MATLPAEPSAGPAAGGEAVAAAAAATEEEEEEARQLLQTLQAAEGEAAAAPEAAAEPPTGLRFSPEQVACVCEALLQAGHAGRLSRFLGALPPAERLRGSDPVLRARALVAFQRGEYAELYRLLESRPFPAAHHAFLQDLYLRARYHEAERARGRALGAVDKYRLRKKFPLPKTIWDGEETVYCFKERSRAALKACYRGNRYPTPDEKRRLATLTGLSLTQVSNWFKNRRQRDRTGGGSGAPCKSESDGNPTTEDESSRSPEDLERGAAPVAAEAPAQGSIFLAGAAPPAPCPASSSILVNGSFLAAGSSPAVLLNGSPVIINSLALGEASSLGPLLLGGGGGAPAPQPSPQGASEGKTSLVLDPQTGEVRLEEAQPEAPETKGAQVAASGPPGEEVPGPLPQVVPGPPPAATFPLPPGPVTSVAAPQVVPLSPPPGYPAGLGPTSPLLNLPQVVPTSQVVTLPQAVGPLQLLAAGPGSPVKVAAAPGPANVHLINSGVGVTALQLPSATAPGNFLLANPVSGSPIVTGVAVQQGKIILTATFPTSMLVSQVLSPAPSLAPSLALPLKPDAAISVPEGALPVAPSPALPEAHALGALSAQPPPAPAATSLPFSPDSSGLLPGFQAPPPEGLLLSPAAVPIWPAGLELSAGTEGLLEAEKGLGTQAPHTVLRLPDPDPEGLLLGATAGGEVDEGLEAETKVLTQLQSVPVEEPLEL*