Sequence details bmy_06580 (Coding sequence)

Part of scaffold_245 (Scaffold)

For more information consult the page for scaffold_245 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PGLYRP1 ENSTTRG00000001610 (Bottlenosed dolphin)

Gene Details

peptidoglycan recognition protein 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000001517, Bottlenosed dolphin)

Protein Percentage 53.7%
cDNA percentage 66.05%
Ka/Ks Ratio 0.73925 (Ka = 0.4596, Ks = 0.6217)

PGLYRP1 ENSBTAG00000002635 (Cow)

Gene Details

Peptidoglycan recognition protein 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000003414, Cow)

Protein Percentage 51.25%
cDNA percentage 62.71%
Ka/Ks Ratio 0.51138 (Ka = 0.4674, Ks = 0.914)

Additional orthologs identified in other species via the OPTIC pipeline.

PGLYRP1 (Human)   Pglyrp1 (Mouse)  

Genome Location

Sequence Coding sequence

Length: 492 bp    Location:365036..361386   Strand:-
Raw sequence 
>bmy_06580
ATGACCCGCCGCCGCGCGCTGCTCGCCTGGGCCCTCCTCGGCCGTCCTCGGCCTCGGAGCGGCTCAGGAAGCCTCGGTAAGCTGCATCCCCATCGTGCCCCGCAGAGGGTGGAAGGCCCTGGCGTCAGAGCGCAGCCAGCGCCTAAGACGGCGCGTGCGCTACATGGTGGTGTCGCACGCAGCGGGCAGCGCCTGCGACACCCCGGCCTCTTGCCTGCAGCAGGTCCAGAACGTGCAGCACTACCACGTGCGGACGCTGGGCTGCTGCGACAAGACAGGCTCCAGTATGAGGGCCGGGGCTGGAACACCTTGGGCACCCACTCAGGTCCCACCTGGAACCCCATACCCCTCGGCATCTCCTTCATGGGTAACTACATGGATCGGGTGCCCCCGCCCCGCGCCATCAGGGCAGCCCAGAGTCTGCTGGCTTGCGGCGTGGCTCAGGGATTCTTGACTCCTAGCTACGAGGTCAAAGGACACCGGGATGTGTAG

Related Sequences

bmy_06580T0 Protein

Length: 164 aa      View alignments
>bmy_06580T0
MTRRRALLAWALLGRPRPRSGSGSLGKLHPHRAPQRVEGPGVRAQPAPKTARALHGGVARSGQRLRHPGLLPAAGPERAALPRADAGLLRQDRLQYEGRGWNTLGTHSGPTWNPIPLGISFMGNYMDRVPPPRAIRAAQSLLACGVAQGFLTPSYEVKGHRDV*