Sequence detailsbmy_06586 (Coding sequence)

Part of scaffold_245 (SequenceType object (1))

For more information consult the page for scaffold_245 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

BT.45031ENSBTAG00000014585 (Cow)

Gene Details

prostacyclin receptor

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000019413, Cow)

Protein Percentage 91.15%
cDNA percentage 92.27%
Ka/Ks Ratio 0.09245 (Ka = 0.0382, Ks = 0.4131)

PTGIR (Minke Whale)

Gene Details

prostaglandin I2 (prostacyclin) receptor (IP)

External Links

Gene match (Identifier: BACU002138, Minke Whale)

Protein Percentage 97.92%
cDNA percentage 98.7%
Ka/Ks Ratio 0.19619 (Ka = 0.0083, Ks = 0.0426)

Additional orthologs identified in other species via the OPTIC pipeline.

PTGIR (Human)   Ptgir (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1275 bp    Location:604194..601878   Strand:-
Raw sequence 
>bmy_06586
CGAGGACCCCGGGGAGGGGAGCGCGGTGGTGGGCGTCGCAGGGGCGGACCCGGCTACCCCTCCGTCGCCACCTCCCACCGCGGGGACCCTGCCGGCCCGGGCGGCTGCGGGAGACCGGGGATGGCGGATTCGTGCCAGAACCTCACGTACGTGCGGGACTCGGTGGGCCCGGCCACCAGCGCCCTGATGTTCGTGGCGGGCGTTGTGGGCAACGGGCTGGCGCTGGGCATCTTGGGGGCGCGGCGACGGTCACGCTCCTCGGCCTTCGCGGTGCTGGTCACCGGGCTGGCGGTCACCGACCTGCTGGGCACGTGCTTCCTGAGCCCGGCGGTGTTCGCGGCCTACGCCCGCAACAGCTCGCTGCTGGGCCTGGCCCGGGGCCGCCCGGCGCTGTGCGATGCCTTCGCCTTCGCCATGACCTTCTTCGGCCTGGCCTCCACGCTCATCCTCTTCGCCATGGCCGTGGAGCGCTGCCTGGCGCTCAGCCACCCCTACCTCTACGCCCAGCTGGACGGGCCGCGCCGCGCCCGCCTGGCGCTGCCCGCCATCTACGCCTTCTGCACCGTCTTCTGCTCGCTGCCCCTGCTGGGCCTGGGCCAACACCAGCAGTACTGCCCGGGCAGCTGGTGCTTCATCCGTATGCGCTCGGCCGAGCTGGGCGGCTGCGCATTCTCGCTGGCCTACGCCAGCCTCGTGGCCCTGCTGGTGGCCGCCATCATCCTCTGCAACGGCTCGGTCACCCTCAGCCTCTGCCGCATGTACCGCCAGCAGAGGCGCCACCACGGCTCGCTGGTCCCCGGCCCCCGGGCGGGCGAAGATGAGGTTGACCACCTGATTCTGCTGGCCCTCATGACGGGCATCATGGCCGTGTGCTCCCTGCCTCTCACGATCCGCGGCTTCACCCAGGCCATCGCCCCGGACAGCAGTGAGATGGGGGACCTCCTCGCTTTCCGTTTCAATGCCTTCAACCCCATCCTGGACCCCTGGGTCTTCATCCTTTTCCGCAAGGCCGTCTTCCAGCGGCTCAAGCTCTGGTTCTGTTGCTTGTGCCCGAGGCCTGGCCAGGGCAACTTGCAGACGTCCCTCTCCCAGCCGGCCTCGGGGAGGAAGGGCTCAAGGGCCCCCACTGCTCTCGGGGGGAAGGAAGGGAGCTGGGTGCATTTGTCAGCCTGGGGCGAGGGGCAGGGGGCACCCTTGCCTGTCCCACAGCCATCCAGCAGCACCGTGGGAACACCGTCCGAAGTGGGGTCCGCGACAGCCTGCTCCCTCTGCTGA

Related Sequences

bmy_06586T0 SequenceType object (3)

Length: 425 aa      View alignments
>bmy_06586T0
RGPRGGERGGGRRRGGPGYPSVATSHRGDPAGPGGCGRPGMADSCQNLTYVRDSVGPATSALMFVAGVVGNGLALGILGARRRSRSSAFAVLVTGLAVTDLLGTCFLSPAVFAAYARNSSLLGLARGRPALCDAFAFAMTFFGLASTLILFAMAVERCLALSHPYLYAQLDGPRRARLALPAIYAFCTVFCSLPLLGLGQHQQYCPGSWCFIRMRSAELGGCAFSLAYASLVALLVAAIILCNGSVTLSLCRMYRQQRRHHGSLVPGPRAGEDEVDHLILLALMTGIMAVCSLPLTIRGFTQAIAPDSSEMGDLLAFRFNAFNPILDPWVFILFRKAVFQRLKLWFCCLCPRPGQGNLQTSLSQPASGRKGSRAPTALGGKEGSWVHLSAWGEGQGAPLPVPQPSSSTVGTPSEVGSATACSLC*