Sequence detailsbmy_06606 (Coding sequence)

Part of scaffold_245 (SequenceType object (1))

For more information consult the page for scaffold_245 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

KPTNENSTTRG00000002295 (Bottlenosed dolphin)

Gene Details

kaptin (actin binding protein)

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000002152, Bottlenosed dolphin)

Protein Percentage 99.31%
cDNA percentage 97.93%
Ka/Ks Ratio 0.0353 (Ka = 0.0031, Ks = 0.0878)

KPTNENSBTAG00000030769 (Cow)

Gene Details

kaptin

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000041053, Cow)

Protein Percentage 96.09%
cDNA percentage 93.56%
Ka/Ks Ratio 0.06123 (Ka = 0.0176, Ks = 0.2873)

KPTN (Minke Whale)

Gene Details

kaptin (actin binding protein)

External Links

Gene match (Identifier: BACU002155, Minke Whale)

Protein Percentage 98.82%
cDNA percentage 98.42%
Ka/Ks Ratio 0.11688 (Ka = 0.0063, Ks = 0.0537)

Additional orthologs identified in other species via the OPTIC pipeline.

KPTN (Human)   Kptn (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1308 bp    Location:1287624..1280393   Strand:-
Raw sequence 
>bmy_06606
ATGGGGGAGGCGGCCGTGGCTGCGGGGCCTTGCCCGCTGCGCGAGGACAGCTTCACACGCTTCTCGTCTCAGAGCAATGTGTACGGGCTGGCGGGCGGCGCGGGCGGGCGCGGGGAGCTGTTGGCCGCCACCCTTAAAGGCAAGGTGCTGGGCTTCCGCTACCAAGACCTCCGACAGAAAATCCGGCCCGTGGCCAAGGAGCTGCAGTTCAATTACATTCCCGTGGACGCAGAGATTGTCTCCATCGACACCTTCAACAAGTCACCCCCAAAGCAGGGCCTGGTGGTGGGGATCACGTTCATCAAGGATTCAGGAGACAAGGGCAGCCCCTTCCTTAACATTTACTGTGACTACGAGCCTGGCTCTGAATACAACCTGGACTCCATTGCCCAGAGCTGCCTGAACCTGGAGCTCCAGTTCACTCCTTTCCAACTGTGCCATGCAGAGGTCCAGGTCGGGGATCAACTGGAGACCGTGTTTCTCCTGAGTGGGAATGACCCAGCCATTCATCTCTACAAGGAGAACGAGGGGCTGCATCAGTTTGAAGAACAGCCCGTGGAAAACCTCTTCCCAGAGCTCACGAACCTGACCAGTAGTGTCCTCTGGCTTGACGTGCACAACCTGCCCGGCACATCCCGGCGACTCTCAGCTCTCGGCTGTCAGAGCGGTTATGTCCGTGTCGCCCACGTAGACCAGCAGAGTCGAGAGGTTCTGCAGACTTGGACGATCCTGCAGGACGGCCCCATCTCCCGAGTGATCGTGTTCAGCCTCTCGGCCCCCGAGGAGACCGAGGACAGGCCACAGCGGGAGGAGTACAGCGTGCTGGTGGCCAGCATGTTGGAACCAGCGGTGGTGTATCGGGACCTGCTGAGCCGGGGCCTCGAGGACCAGCTTCTCCTGCCTGGCAGCGACCAGTTTGACAGCGTCCTCTGTGGCCTGGTCACCGACATCGATTTGGATGGGCGGCCGGAGGTCCTGGTGGCCACCTACGGACAGGAGCTGCTCTGTTACAAGTACTGCAGCCCAGAGCGCGGGCTCCCCGGGGCCCAGCGCGGCTTCCGCTTGCTGTGGCAGCGGAGCTTCTCTAGCCCCCTGCTGGCCATGGCGCACGTGGACCTGACCGGGGACGGGCTGCGCGAGCTCGCTGTGGTCTCCCTGAAGGGCGTACACATCCTGCAGCACAGCCTGATCCAGGCCTCGGAGCTGGTTCTGACCCGGCTTCGGCACCAAGCGGAGCAGAGGAGACGTCAGCCACAGAGGCTGGGGGACGGGGTGGGCGCCGGGCCTGCTGAGACCCCGGCCTCCTGA

Related Sequences

bmy_06606T0 SequenceType object (3)

Length: 436 aa      View alignments
>bmy_06606T0
MGEAAVAAGPCPLREDSFTRFSSQSNVYGLAGGAGGRGELLAATLKGKVLGFRYQDLRQKIRPVAKELQFNYIPVDAEIVSIDTFNKSPPKQGLVVGITFIKDSGDKGSPFLNIYCDYEPGSEYNLDSIAQSCLNLELQFTPFQLCHAEVQVGDQLETVFLLSGNDPAIHLYKENEGLHQFEEQPVENLFPELTNLTSSVLWLDVHNLPGTSRRLSALGCQSGYVRVAHVDQQSREVLQTWTILQDGPISRVIVFSLSAPEETEDRPQREEYSVLVASMLEPAVVYRDLLSRGLEDQLLLPGSDQFDSVLCGLVTDIDLDGRPEVLVATYGQELLCYKYCSPERGLPGAQRGFRLLWQRSFSSPLLAMAHVDLTGDGLRELAVVSLKGVHILQHSLIQASELVLTRLRHQAEQRRRQPQRLGDGVGAGPAETPAS*