Part of scaffold_260 (Scaffold)

For more information consult the page for scaffold_260 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PPAP2C ENSTTRG00000003761 (Bottlenosed dolphin)

Gene Details

phosphatidic acid phosphatase type 2C

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000003529, Bottlenosed dolphin)

Protein Percentage 86.52%
cDNA percentage 91.01%
Ka/Ks Ratio 0.42769 (Ka = 0.071, Ks = 0.1659)

PPAP2C ENSBTAG00000000717 (Cow)

Gene Details

Lipid phosphate phosphohydrolase 2

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000000955, Cow)

Protein Percentage 92.88%
cDNA percentage 91.76%
Ka/Ks Ratio 0.07679 (Ka = 0.0324, Ks = 0.4218)

PPAP2C  (Minke Whale)

Gene Details

phosphatidic acid phosphatase type 2C

External Links

Gene match (Identifier: BACU006559, Minke Whale)

Protein Percentage 95.87%
cDNA percentage 98.35%
Ka/Ks Ratio 1.13469 (Ka = 0.0174, Ks = 0.0154)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 804 bp    Location:38181..29765   Strand:-
>bmy_06624
ATGGAGCGGAGGTGGGTCTTCGTGCTGCTCGACGTGCTGTGCGTGCTGGTCGCCTCTCTGCCTTCCGCCATCCTGACGCTCGTGAACGCCCCGTACAAGCGAGGATTCTACTGCGGAGATGACTCCATCCGGTACCCCTACTGTCCAGACACCATCACCCATGGGCTCATGGCCGGGGTCATCATCACCGCCACCGTCGTCCTTGTGTCGGCCGGGGAGGCCTACCTGGTGTACACAGACCGCCTCTACTCCCGCTCCAACTTCAACAACTACCTGGCCGCCCTCTACAAGGTGCTGGGGACGTTCCTGTTCGGGGCTGCAGTGAGCCAGTCGCTGACAGACCTGGCCAAGTACATGGCTGGCCGGCTGCGGCCCAACTTCCTGGCCGTGTGTGACCCGGACTGGAGCCGCGTCAACTGCTCCGTGTACGTGCAGGTGGAGGTGTGCAGGGGAAGCCCTGCTGACGTCACCGAGTCCAGGTTATCCTTCTACTCTGGACACTCCTCCTTTGGAATGTACTGCATGATGTTCTTGGCGCTCTACGTGCAGGCCCGGCTGTGCTGGAAGTGGGCACGGCTGCTGCGGCCCACCGTGCAGTTTTTCCTGGTGGCCTTTGCCCTTTACGTGGGCTACACCCGTGTGTCTGACCACAAACACCACTGGAGTGATGTTCTCGTTGGCCTCCTGCAGGGGGCGCTGGTGGCCGGCCTCACTGTCCGCTACATCTCCGACTTCTTCAAAGCCCGGCCCCCGCAGCACTGCCTGGAGGAGGAGGAGCTGGAGCGGAAGTCCAGCCATCACTGA

Related Sequences

bmy_06624T0 Protein

Length: 268 aa      View alignments
>bmy_06624T0
MERRWVFVLLDVLCVLVASLPSAILTLVNAPYKRGFYCGDDSIRYPYCPDTITHGLMAGVIITATVVLVSAGEAYLVYTDRLYSRSNFNNYLAALYKVLGTFLFGAAVSQSLTDLAKYMAGRLRPNFLAVCDPDWSRVNCSVYVQVEVCRGSPADVTESRLSFYSGHSSFGMYCMMFLALYVQARLCWKWARLLRPTVQFFLVAFALYVGYTRVSDHKHHWSDVLVGLLQGALVAGLTVRYISDFFKARPPQHCLEEEELERKSSHH*