Part of scaffold_260 (Scaffold)

For more information consult the page for scaffold_260 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TPGS1 ENSTTRG00000000390 (Bottlenosed dolphin)

Gene Details

tubulin polyglutamylase complex subunit 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000000363, Bottlenosed dolphin)

Protein Percentage 98.17%
cDNA percentage 98.53%
Ka/Ks Ratio 0.0986 (Ka = 0.0071, Ks = 0.0718)

TPGS1 ENSBTAG00000010772 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000014258, Cow)

Protein Percentage 96.34%
cDNA percentage 94.51%
Ka/Ks Ratio 0.03587 (Ka = 0.0148, Ks = 0.414)

TPGS1  (Minke Whale)

Gene Details

tubulin polyglutamylase complex subunit 1

External Links

Gene match (Identifier: BACU006551, Minke Whale)

Protein Percentage 88.28%
cDNA percentage 90.6%
Ka/Ks Ratio 0.40637 (Ka = 0.071, Ks = 0.1748)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 858 bp    Location:177881..184411   Strand:+
>bmy_06631
ATGGACGTCCTTCCGGTCCCGCTGCCCTCAGCAAAGATGGCGGCAGTGGAGAAGCGGCGGCTGGCTGTGGCCCAGGCGGCCAATTTCACAGGCAGCGGCCGGCCGGGGGTGTCCCGAGCAGCGGCGACGGCCGAGAGTGAGGAGGACTTCCTGCGGCAGGTCGGCGTGACGGAGATGCTGCGCGCGGCCCTGCTGAAGGTGCTGGAGGCGCGACCCGAGGAGCCCATCGCCTTCTTGGCGCACTACTTCGAGAACATGGGCCTGCGGTCTCCTGCAAACGGCGGCGTCGGGGAGCCCCCGGGCCAGCTCCTGCTGCAGCAGCAGCGCCTGGGCCGCGCGCTGTGGCACCTTCGCCTGGCTCACCACTCCCAGAGCGGGCGCAAGAAGAAGCCGGGGCTGGACGGGCGCACGTACAGCGAGCTGCTGAAGCGCATCTGCCGGGACGGGGAGGCCCCCGAGGAGGTGGTGGCGCCGCTGTTGCGCAAGATCCAGTGCCGGGACCACGAGGCAGTGCCGCTGGCCGTGTTCCGTGCGGGGATGCTCACCTGCTTCGTGCTGCTGGAGTTCGTGGCGCGCGCCGGCGCCCTCTACCGGCTGTTGGAGGACCCGGGCCTGGCCGTGGCTGACCGCCACGTGGGCCAGGCCGTGCTGGACACGCTGGAGGGGGCCCTGCAGGCCAGCGACGACACTGCGCCCGCGCGCTACCTGGAGGCCGGCTCGCGCCTGGGGCCCGACAGCCTGGCGCTGGCCATGGACCGCGCGCTGGTGGCCCGGCGGCCCAGCGCCCCCATGACCCGGGAGGAGTTCCTGGAAAAGGCGGCCGCCCTCTTTATCGCCAAGGTCAAGCCCGTGGGCTGA

Related Sequences

bmy_06631T0 Protein

Length: 286 aa      View alignments
>bmy_06631T0
MDVLPVPLPSAKMAAVEKRRLAVAQAANFTGSGRPGVSRAAATAESEEDFLRQVGVTEMLRAALLKVLEARPEEPIAFLAHYFENMGLRSPANGGVGEPPGQLLLQQQRLGRALWHLRLAHHSQSGRKKKPGLDGRTYSELLKRICRDGEAPEEVVAPLLRKIQCRDHEAVPLAVFRAGMLTCFVLLEFVARAGALYRLLEDPGLAVADRHVGQAVLDTLEGALQASDDTAPARYLEAGSRLGPDSLALAMDRALVARRPSAPMTREEFLEKAAALFIAKVKPVG*