Part of scaffold_260 (Scaffold)

For more information consult the page for scaffold_260 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

BT.43153 ENSBTAG00000021616 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000039032, Cow)

Protein Percentage 83.92%
cDNA percentage 87.94%
Ka/Ks Ratio 0.22759 (Ka = 0.0843, Ks = 0.3704)

PRSS57  (Minke Whale)

Gene Details

protease, serine, 57

External Links

Gene match (Identifier: BACU006543, Minke Whale)

Protein Percentage 94.12%
cDNA percentage 96.73%
Ka/Ks Ratio 0.48683 (Ka = 0.0278, Ks = 0.0572)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 615 bp    Location:301224..297593   Strand:-
>bmy_06639
ATGAGGCCCGGGGAGGGGAGCTGGGACTGCCTGCTGCTGACTGTGACCGCCATCCTGATGCTGCCCATGAGGCCCCCAGGCTCCTGGGCGTCCCGCATCATCGGGGGCCACAAGGTGACCCCCCACTCCCGGCCCTACATGGCGTCTCTGAACAGCTCTGCCATCCTGGGTCCTGCAGTGGGGCTGCTGGGGCTGCCACGGAGGCCACCCAGGGCCGGGGCACGGTGCAAGGTGGCCGGCTGGGGCTCCGTGTCCGACTTCGAGGAGCTGCCGCCTGTGTTGATGGAGGCCGACGTCCGCGTGCTGGGCCTGGACGTCTGCAACAGCTCCTGGAGGGGGCAGCTGAGCCCTGCCATGCTCTGCACCTGCAGTGGGGACCGCCAGCGACGTGGCTTCTGCTCGGCAGACTCTGGGGGGCCCCTGGTTTGCAGAAATCGGGCCCATGGCCTCGTCTCCTTCTCTGGCGTCTGGTGTGGCGACCCCAAGACCCCCGACGTGTACACACTGGTGTCCGCCTTCGTGACCTGGATCTGGGACGTGGTTCGGCGGGGCCCGCACGGCCCCCAGCCCAGCCCCCCACCCAGGACCACTGGGGGCCCTGCAGGAGTTGCCTGA

Related Sequences

bmy_06639T0 Protein

Length: 205 aa      View alignments
>bmy_06639T0
MRPGEGSWDCLLLTVTAILMLPMRPPGSWASRIIGGHKVTPHSRPYMASLNSSAILGPAVGLLGLPRRPPRAGARCKVAGWGSVSDFEELPPVLMEADVRVLGLDVCNSSWRGQLSPAMLCTCSGDRQRRGFCSADSGGPLVCRNRAHGLVSFSGVWCGDPKTPDVYTLVSAFVTWIWDVVRRGPHGPQPSPPPRTTGGPAGVA*