Sequence details bmy_06642 (Coding sequence)

Part of scaffold_260 (Scaffold)

For more information consult the page for scaffold_260 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PTBP1 ENSTTRG00000003439 (Bottlenosed dolphin)

Gene Details

polypyrimidine tract binding protein 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000003226, Bottlenosed dolphin)

Protein Percentage 99.25%
cDNA percentage 96.92%
Ka/Ks Ratio 0.01367 (Ka = 0.003, Ks = 0.2229)

Additional orthologs identified in other species via the OPTIC pipeline.

PTBP1 (Cow)   PTBP1 (Human)   Ptbp1 (Mouse)  

Genome Location

Sequence Coding sequence

Length: 1596 bp    Location:376350..388181   Strand:+
Raw sequence 
>bmy_06642
ATGGACGGCATCGTCCCAGACATAGCAGTTGGTACAAAGCGGGGATCTGACGAGCTCTTCTCTGCCTGTGTCACTAACGGACCCTTTATCATGAGTAGCAACTCGGCCTCCACAGCAAATGGAAACGACAGCAAGAAATTCAAGGGGGACAACAGGAGCACAGGCGTGCCCTCCAGGGTGATCCACATCCGAAAGCTGCCCAGTGACGTCACTGAGGGGGAGGTCATCTCCTTGGGGCTGCCCTTCGGGAAGGTCACCAATCTCCTGATGCTGAAAGGGAAGAACCAGGCCTTCATCGAGATGAACACAGAGGAGGCTGCCAACACCATGGTGAACTATTATACGTCGGTGACGCCCGTACTGCGTGGCCAGCCCATCTACATCCAGTTCTCCAACCACAAGGAGCTCAAGACGGACAGCTCGCCCAACCAGGCGCGGGCCCAGGCGGCCCTGCAGGCGGTGAACTCAGTCCAGTCGGGAAACCTGGCCCTGGCCGCCTCAGCCGCGGCGGTGGACGCGGGGATGGCGATGGCCGGCCAGAGCCCGGTGCTCAGGATCATTGTGGAGAACCTCTTCTACCCGGTGACCCTGGACGTACTTCACCAGATCTTTTCCAAGTTCGGCACCGTCCTGAAGATCATCACTTTCACCAAGAACAATCAGTTCCAGGCGCTGCTGCAGTACGCCGACCCCGTGAGCGCCCAGCACGCCAAGCTGTCGCTGGACGGCCAGAACATCTACAACGCCTGCTGCACCCTGCGCATCGACTTCTCCAAGCTCACCAGCCTCAACGTCAAGTACAACAACGACAAGAGCCGCGACTACACGCGCCCCGATCTGCCCTCCGGCGACAGCCAGCCCTCGCTGGACCAGACCATGGCTGCAGCCTTCGGCCTCTCCGTCCCTAACGTGCACGGGGCCCTGGCTCCTCTGGCCATCCCGTCGGCAGCGGCGGCAGCGGCAGCGGCGGGCCGGATCGCCATACCGGGCCTGGCAGGGGCAGGAAACGCTGTCCTGCTGGTCAGCAACCTCAACCCCGAGAGAGTCACACCCCAAAGCCTCTTTATTCTTTTCGGCGTGTACGGCGACGTGCAGCGGGTGAAGATCCTGTTCAACAAGAAGGAGAACGCCCTGGTGCAGATGGCCGACGGGAGCCAGGCCCAGCTGGCCATGAGCCACCTCAACGGGCACAAGCTGCACGGGAAGCCGGTGCGCATCACACTCTCCAAGCACCAGAACGTGCAGCTGCCCCGTGAGGGCCAGGAGGACCAGGGCCTGACCAAGGACTACGGCAACTCGCCCCTGCACCGCTTCAAGAAGCCCGGCTCCAAGAACTTCCAGAACATCTTCCCGCCCTCCGCCACCCTGCACCTCTCCAATATCCCGCCCTCCATCTCCGAGGATGACCTCAAGATTCTCTTCTCCAGCAACGGCGGGATCGTGAAAGGGTTCAAGTTCTTCCAGAAGGACCGCAAAATGGCGCTGATCCAGATGGGCTCCGTGGAAGAGGCCATCCAGGCGCTCATCGACCTGCACAACCACGACCTGGGTGAGAACCACCACCTGCGGGTGTCCTTCTCCAAGTCCACCATCTAG

Related Sequences

bmy_06642T0 Protein

Length: 532 aa      
>bmy_06642T0
MDGIVPDIAVGTKRGSDELFSACVTNGPFIMSSNSASTANGNDSKKFKGDNRSTGVPSRVIHIRKLPSDVTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTEEAANTMVNYYTSVTPVLRGQPIYIQFSNHKELKTDSSPNQARAQAALQAVNSVQSGNLALAASAAAVDAGMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYNACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSLDQTMAAAFGLSVPNVHGALAPLAIPSAAAAAAAAGRIAIPGLAGAGNAVLLVSNLNPERVTPQSLFILFGVYGDVQRVKILFNKKENALVQMADGSQAQLAMSHLNGHKLHGKPVRITLSKHQNVQLPREGQEDQGLTKDYGNSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSISEDDLKILFSSNGGIVKGFKFFQKDRKMALIQMGSVEEAIQALIDLHNHDLGENHHLRVSFSKSTI*