Sequence detailsbmy_06673 (Coding sequence)

Part of scaffold_260 (SequenceType object (1))

For more information consult the page for scaffold_260 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

APC2ENSTTRG00000014359 (Bottlenosed dolphin)

Gene Details

adenomatosis polyposis coli 2

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000013628, Bottlenosed dolphin)

Protein Percentage 58.35%
cDNA percentage 58.16%
Ka/Ks Ratio 0.10271 (Ka = 0.019, Ks = 0.1848)

APC2ENSBTAG00000015433 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000035274, Cow)

Protein Percentage 93.21%
cDNA percentage 90.04%
Ka/Ks Ratio 0.04889 (Ka = 0.033, Ks = 0.6751)

APC2 (Minke Whale)

Gene Details

adenomatosis polyposis coli 2

External Links

Gene match (Identifier: BACU006515, Minke Whale)

Protein Percentage 96.93%
cDNA percentage 96.7%
Ka/Ks Ratio 0.1144 (Ka = 0.0159, Ks = 0.1387)

Additional orthologs identified in other species via the OPTIC pipeline.

APC2 (Human)  

Genome Location

Sequence SequenceType object (2)

Length: 3627 bp    Location:884827..898507   Strand:+
Raw sequence 
>bmy_06673
ATGACGAGCTCCGTGGCGCCCTACGAACAGCTGGTGCGGCAGGTGGAGGCCTTGAAGGCCGAGAACAGTCACCTGAGGCAGGAGCTTCGGGATAACTCAAGCCACTTGTCCAAGCTGGAGACAGAAACGTCGGGCATGAAGGAGGTCCTGAAGCACTTGCAGGGCAAGCTGGAGCAGGAGGCCCGCGTGCTGGTGTCCTCGGGGCAGACCGAGGTGCTGGAGCAGCTGAAAGCCCTGCAGATGGACATCACCAGCCTGTACAACCTCAAGTTCCAACCCCCGGCTCTGGCCCCCGAGCCCACTGCCCGGACCCCCGAGGGAAGCCCGGTGCACAGCTCTGGGCCCTCCAAGGACAGCTTTGGGGAGCTGAGCCGGGCCACCATCCAGCTGCTGGAGGAACTGGACCGGGAACGGTGTTTCCTGTTGAATGAGATTGAGAAGGAGGAGAAGGAGAAGCTCTGGTATTACTCGCAGCTGCAGGGCCTATCCAAGCGCCTGGACGAACTCCCGCACGTGGAGACGCAGTTCTCGATGCAGATGGATCTGATCCGCCAGCAGCTGGAGTTCGAAGCCCAGCACATCCGCTCGCTGATGGAGGAGCGCTTCGGCACCTCGGACGAGATGGTGCAGCGGGCGCAGATCCGTGCTTCCCGCCTGGAGCAGATCGACAAGGAATTGCTGTCGGCGCAGGACCGGGTGCAACAGACCGAGCCCCAGGCCTTGCTGGCAGTGAAGTCGATGCCGATGGATGAGGACCCCGAGGCTGAGGTCCCCACGCACCCTGAGGATGGTGCCCCTCAGCCGGGCAACAGCAAGGTGGAGGTGGTCTTCTGGCTGCTGTCCATGCTGGCGACGCGTGACCAGGAGGACACGGCACGGACGCTGCTCGCCATGTCGAGCTCACCTGAGAGCTGCGTGGCCATGCGCCGCTCGGGCTGCCTGCCGCTGCTGCTGCAGATCCTGCACGGCACCGAGGCCGGGGCTGGGGGTCGCAACGGGACCCCAGGGGCGCCGGGAGCCAAGGATGCGCGCATGCGCGCCAACGCAGCGCTGCACAACATCGTCTTCTCGCAGCCGGACCAGGGTCTGGCGCGCAAGGAAATGCGCGTTCTGCACGTGCTCGAGCAGATCCGTGCCTACTGTGAGACCTGCTGGGACTGGCTGCAGGCCCGGGACGGCGGGCCCGAGGGCGGCGGCGCCGGCGGCGCCCCGGTCCCCATCGAGCCACAGATCTGCCAGGCCACCTGCGCCGTGATGAAGCTGTCCTTCGACGAGGAATACCGCCGCGCCATGAACGAGCTGGGTGGGCTGCAGGCTGTGGCGGAGTTACTGCAGGTCGACTACGAGATGCACAAGATGACCCGGGACCCTCTCAACCTGGCCCTGCGCCGATACGCCGGCATGACCCTCACCAACCTAACCTTCGGGGACGTCGCCAACAAGGTGGTGTCCAGCATCCTGCGTAACCTGTCCTGGAGGGCGGACATCAACAGCAAGAAGGTGCTGAGGGAGGTGGGCAGCATGACGGCCCTGATGCAGTGCGTCCTGCGAGCCTCCAAGGAGTCCACCCTGAAGAGCGTGCTCAGCGCCCTGTGGAACCTCTCAGCGCACAGCACGGAGAACAAGGCTGCCATCTGCCAGGTGGACGGCGCCCTGGGCTTCCTGGTCAGCACACTGACCTACAAGTGCCAGAGCAACTCGCTGGCCATCATCGAGAGCGGAGGCGGCATCCTGCGCAACGTGTCCAGCCTCATCGCCACCCGTGAGGACTACAGGCAGGTGCTGCGGGACCACAGCTGCCTGCAGACGCTGCTGCAGCACCTGACGTCGCACAGCCTGACCATCGTGAGCAACGCGTGCGGCACGCTCTGGAACCTGTCGGCCCGCAGCGCCGGCGACCAGGAGCTGCTGTGGGACCTGGGCGCCGTGGGCATGCTGCGCAGCCTGGTGCACTCCAAGCACAAGATGATCGCCATGGGCAGCGCCGCCGCCCTGCGCAACCTGCTGGCCCACCGGCCCGCCAAGTACCAGGCGGCGGCCACCGCCGTCTCCCCCGGCGCCTGTGCGCCCAGCCTGTACGTGCGCAAGCAGCGGGCGCTGGAGGCCGCGCTGGACGCGCGGCACCTGGCGCAGGCGCTCGACCACCTGGAGACGCAGGGCCTGCCCGAGGCCGAGGCTGCCTCCAAGAAGCCGCTGCCGCCCCTGCGCCACCTGGACGGCCTGGCCCAGGACTACGCTTCTGACTCGGGCTGCTTCGATGATGACGACGCACCCTCCCTGGCCACCGCTGCTGCCGCCACCGCCGAGCCCGCCAGCCCCGCCGTGCTGCCCCTCTTCCTGGGCAGCCCCTTCCTGCAGGGCCAGGCGCTGGCCCGCGCCCCGCCCGCCCGCCGGGGCGGCCTGGAGTCCGAGAAGGAGGCCGGCGGGGAGGCAGCTGTGGCAGCCAGGGCCCAAGCTGGCACTGGCAGTGGCGCGCATCGACCGGCTGGTGGAGGACATCTCGGCCCTGCACACCTCGCGGCCCACGCCAGCCTCTCCAACGACAGTCTTAACAGCGGCAGCACCAGCGACGGGCACTGTCCCCGCGAGCACTCGCGGCCCTACCCGCTGGCCGCACTGGCCGAGCATTGCGAGGGACCCCTGTGCGGCCAGGCGCGGCCCAGCCAGCTTGACCTCAACCTGCCCAGCGGCCAGGTTGAGCCCAAGGCCCGGGACGCCGCCGCCACAGATGCCCGCGTGTGCACCATCAAGCTGTCGCCCATCTACCAGCATGTGCCGCTGCTTGAGGGCACCGCCAGGGGGGGCGCGGGGTCCCTGGCCCCCAGGGCCCGGAAACAGGCCTGGCTGCCCGCAGAGGACCTGAGCAAGGTGCCCGAGAAGCTGGCGGCGGAGAAGGTACCCCTCTGCCTGTCGCGCTGCAGCTCCCTGTCCTCACTGTCCTCGGCCGGCCGCCCAGGGCCCAGTGAGGCCGGGGACCTGGACGACAGCGACTCGTCCCTGGAGGGGCTGGAGGAGGCCGGCCCCAGTGAGGCCGGGCTGGACGGGGCCTGGCAGGGGCCAGGGGCCGCCTCCCTGCCCATGGCCATCCCGGTGCCTCAGCAGGGCCGGGGCCTGGGGGTGGAGGACGCCACGCCGTCCAGCTCGTCCGAGAACTGCGTGCAGGAGACGCCGCTGGTGCTGAGCCGCTGCAGCTCGGTCAGCTCGCTGGGCAGCTTCGAGAGCCCATCCATCGCCAGCTCCGTTGCCAGCGACCCGTGCAGCGGGCTGGGCAGCGGCACAGTCAGCCCCAGCGAGCTTCCTGACAGCCCCGGGCAGACCATGCCACCGAGCCGCAGCAAGACGCCCCCGCCGGCCCCCGCGCCGCCGGGCGAGCGTGAGGCCACCCAGTTCAGCCTGCAGTGGGAGAGCTACGTGAAGCGCTTCCTGGACATCGCCGACTGCCGGGAGCGCTGCCGGCTGCCGTCCGAGCTGGACGCGGGCAGCGTGCGCTTCACTGTGGAGAAGCCCGACGAGAACTTCTCATGTGCTTCCAGCCTGAGTGCGCTGGCTCTGCACGAGCTCTACGTGCAGAAGGACGTGGAGCTGCGGCTGCTGCCCCCGGCCTGCCCCGAGCGCAGCAGTGGGGGA

Related Sequences

bmy_06673T0 SequenceType object (3)

Length: 1209 aa      View alignments
>bmy_06673T0
MTSSVAPYEQLVRQVEALKAENSHLRQELRDNSSHLSKLETETSGMKEVLKHLQGKLEQEARVLVSSGQTEVLEQLKALQMDITSLYNLKFQPPALAPEPTARTPEGSPVHSSGPSKDSFGELSRATIQLLEELDRERCFLLNEIEKEEKEKLWYYSQLQGLSKRLDELPHVETQFSMQMDLIRQQLEFEAQHIRSLMEERFGTSDEMVQRAQIRASRLEQIDKELLSAQDRVQQTEPQALLAVKSMPMDEDPEAEVPTHPEDGAPQPGNSKVEVVFWLLSMLATRDQEDTARTLLAMSSSPESCVAMRRSGCLPLLLQILHGTEAGAGGRNGTPGAPGAKDARMRANAALHNIVFSQPDQGLARKEMRVLHVLEQIRAYCETCWDWLQARDGGPEGGGAGGAPVPIEPQICQATCAVMKLSFDEEYRRAMNELGGLQAVAELLQVDYEMHKMTRDPLNLALRRYAGMTLTNLTFGDVANKVVSSILRNLSWRADINSKKVLREVGSMTALMQCVLRASKESTLKSVLSALWNLSAHSTENKAAICQVDGALGFLVSTLTYKCQSNSLAIIESGGGILRNVSSLIATREDYRQVLRDHSCLQTLLQHLTSHSLTIVSNACGTLWNLSARSAGDQELLWDLGAVGMLRSLVHSKHKMIAMGSAAALRNLLAHRPAKYQAAATAVSPGACAPSLYVRKQRALEAALDARHLAQALDHLETQGLPEAEAASKKPLPPLRHLDGLAQDYASDSGCFDDDDAPSLATAAAATAEPASPAVLPLFLGSPFLQGQALARAPPARRGGLESEKEAGGEAAVAARAQAGTGSGAHRPAGGGHLGPAHLAAHASLSNDSLNSGSTSDGHCPREHSRPYPLAALAEHCEGPLCGQARPSQLDLNLPSGQVEPKARDAAATDARVCTIKLSPIYQHVPLLEGTARGGAGSLAPRARKQAWLPAEDLSKVPEKLAAEKVPLCLSRCSSLSSLSSAGRPGPSEAGDLDDSDSSLEGLEEAGPSEAGLDGAWQGPGAASLPMAIPVPQQGRGLGVEDATPSSSSENCVQETPLVLSRCSSVSSLGSFESPSIASSVASDPCSGLGSGTVSPSELPDSPGQTMPPSRSKTPPPAPAPPGEREATQFSLQWESYVKRFLDIADCRERCRLPSELDAGSVRFTVEKPDENFSCASSLSALALHELYVQKDVELRLLPPACPERSSGG