Part of scaffold_260 (Scaffold)

For more information consult the page for scaffold_260 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SGTA ENSTTRG00000008147 (Bottlenosed dolphin)

Gene Details

small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000007708, Bottlenosed dolphin)

Protein Percentage 93.88%
cDNA percentage 94.48%
Ka/Ks Ratio 0.27899 (Ka = 0.0393, Ks = 0.1408)

SGTA ENSBTAG00000015090 (Cow)

Gene Details

Small glutamine-rich tetratricopeptide repeat-containing protein alpha

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000020081, Cow)

Protein Percentage 92.45%
cDNA percentage 89.45%
Ka/Ks Ratio 0.10779 (Ka = 0.0491, Ks = 0.4552)

SGTA  (Minke Whale)

Gene Details

small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha

External Links

Gene match (Identifier: BACU006508, Minke Whale)

Protein Percentage 82.1%
cDNA percentage 85.86%
Ka/Ks Ratio 0.43893 (Ka = 0.132, Ks = 0.3008)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 870 bp    Location:991549..1007083   Strand:+
>bmy_06681
ATGGATAACAAGAAGCGTCTGGCCTACGCCATCATCCGGTTCCTGCATGACCAGCTCCGGCATGGGGAGCTCTCCTCTGACGCCCAGGAGAGCTTGGAAGTTGCCATCCAATGCCTGGAGACCGCTTTCGGGGTGACGGTGGAGGATAGCGACCTTGCGCTCCCCCAGACTCTTCCCGAAATATTTGGAGCAGCTGCGGCGGGCAGGGAGATACCACCTGATCTGAGGAGCCCCCAGCGAACCCCACCTTCGGAGGAGGACTCGGCCGAGGCAGAACGCCTCAAAACCGAAGGGAACGAACAGATGAAAGTAGAAAACTTTGAGGCTGCCGTGCACTTCTATGGGAAAGCCATCGAGCTGAACCCCGCCAACGCCGTCTACTTCTGTAACAGCCTGGCTCTGTCCAGCCTGAACAAGCACACGGAGGCCGTGGCCTACTACAGGAAGGCCCTGGAGCTGGACCCCGACAACGAGACCTACAAGTCCAACCTCAAGGTGGCGGAGCTGAGGCTGAGAGAGGCACCCAGTCCCACGGGAGGTGTTGGCAGCTTTGACATCGCGGGCCTGCTGAACAACCCGAGCTTCATGAGCATGAGGGGAAGGGCCAGGCGGGGCTCAGAGGGAGGAGGGCTGAGCCGTCTGCGAGTCAAGGGCTCTCTTTGCAGCATGTCCGGCATGATTTCGGGCGGCCACAACCCCCTGGGGACTCCCGGCACCAACCCCTCGCAGAACGACCTGGCCAGCCTCATCCAGGCGGGCCAGCAGTTCGCCCAGCAGATGCAGCAACAGAACCCAGAGTTGATAGAGCAGCTGCGCAGTCAGATCCGGAGCCGGACCCCCAGTGCCAGCGGCGACGGCCCGCAGGAATGA

Related Sequences

bmy_06681T0 Protein

Length: 290 aa      View alignments
>bmy_06681T0
MDNKKRLAYAIIRFLHDQLRHGELSSDAQESLEVAIQCLETAFGVTVEDSDLALPQTLPEIFGAAAAGREIPPDLRSPQRTPPSEEDSAEAERLKTEGNEQMKVENFEAAVHFYGKAIELNPANAVYFCNSLALSSLNKHTEAVAYYRKALELDPDNETYKSNLKVAELRLREAPSPTGGVGSFDIAGLLNNPSFMSMRGRARRGSEGGGLSRLRVKGSLCSMSGMISGGHNPLGTPGTNPSQNDLASLIQAGQQFAQQMQQQNPELIEQLRSQIRSRTPSASGDGPQE*