Sequence detailsbmy_06684 (Coding sequence)

Part of scaffold_260 (SequenceType object (1))

For more information consult the page for scaffold_260 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

LMNB2ENSTTRG00000007050 (Bottlenosed dolphin)

Gene Details

lamin B2

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000006667, Bottlenosed dolphin)

Protein Percentage 74.48%
cDNA percentage 74.73%
Ka/Ks Ratio 0.09228 (Ka = 0.0144, Ks = 0.1565)

BT.80892ENSBTAG00000013624 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000018110, Cow)

Protein Percentage 93.1%
cDNA percentage 91.29%
Ka/Ks Ratio 0.04599 (Ka = 0.0313, Ks = 0.681)

LMNB2 (Minke Whale)

Gene Details

lamin B2

External Links

Gene match (Identifier: BACU006502, Minke Whale)

Protein Percentage 98.23%
cDNA percentage 98.52%
Ka/Ks Ratio 0.10133 (Ka = 0.0078, Ks = 0.0768)

Additional orthologs identified in other species via the OPTIC pipeline.

LMNB2 (Human)   Lmnb2 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1710 bp    Location:1246645..1258627   Strand:+
Raw sequence 
>bmy_06684
CCCCAGGTGAGCGGCATCAAGACACTGTATGAGGCGGAGCTGGCTGATGCCCGCCGGGTGCTGGACGAGACGGCCCGGGACCGGGCCCGGCTGCAGATCGAAATTGGGAAGCTGAGGGCCGACCTGGAGGAGGCCAACAAGAGCGCAAAGAAGAGGGAGGGCGAGCTGACGGTGGCCCAGGGCCGCGTCAGGGACCTGGAGTCCGTGTTCCACCAGAGTGAGGCGGAGCTGGCCGCCGCTCTCAGCGACAAGCGCACCCTGGAGAACGACGTGGTGGAGCTGAGGGCCCAGCTGGCCAAGGCGGAGGATGGGCACGCGGTGGCCAAAAAGCAGCTGGAGAAGGAGACGCTGATGCGCGTGGACCTGGAGAACCGCTGCCAGAGCCTGCAGGAGGAGCTGGCCTTCCGCAAGGACGCCGGGGCGGTGAGCGCGCGGCTGTGTCCCCAGGAGGTGCGGGAGACGCGACGGCGACACGAGCAGCGCCTGGTGGAGGTGGACAGCAGCCGGCAGCAGGAGTATGACTTCAAGATGGCCCAGGCGCTGGAGGAGCTGCGGGCGCAGCACGATGAGCAAGTGCGGCTCTACCGCCTGGAGCTGGAGCAGACCTACCAGGCCAAGCTGGACAACGCCAAGCTGATCTCCGACCAGAACGACAAGGCGGCCAGCGCCGCTCGGGAGGAGCTGAAGGAGGCCCGCATGCGGGTTGAGTCCCTCAGCTACCAGCTCTCCGGCCTCCAGAAGCAGGCGAACGCGGCTGAGGACCGGATCCGGGAGCTGGAGGAGACCGTGGCCGGGGAGCGGGACAAGTTCCGGAAGATGCTGGACGCCAAGGAGCGGGAGATGACGGAGATGCGGGACGTGATGCAGCAGCAGCTGGCCGAGTACCAGGAGCTGCTGGACGTCAAGCTGGCCCTGGACATGGAGATCAGCGCCTACCGCAAGCTCCTGGAGGGCGAGGAGGAGAGGCTGAAGCTGTCCCCCAGCCCGTCGTCGCGCATCACCATCTCGCGGGCCACATCGAGCAGCAGCGGCAGCAGCGTGTCCGTGTCCGGGCGCCTGGGCCGCAGCAAGCGGAAGCGGCTGGAGGTGCAGGAGCCGCTGGGCACGGGCTCCAGCGGCACCGGCTTGGGCAGCAGCGGCAGCAGCAGCTTCCGCCTGGCCCAGCAGGCCTCGGCCTCGGGCAGCATCAGCATCGAGGAGATCGACCTGGAGGGCAAGTTCGTGCAGCTGAAGAACAGCTCGGACAAGGTGAGGCCCCCACCCCACCCGTGGGGAGGCCCGCGGGTCTTCTCGGAGCCGTGGGCCAACGCCCGTCCCCTTTGCCAGGATCAGTCTTTGGGCAACTGGAGGATCAAGAGGCAGATCCTAGAAGGGGAGGAGATCGCCTACAAGTTCACGCCCAAGTATGTGCTGCGGGCCGGCCAGACGGTCACGGTGTGGGCAGCCGGTGCAGGGGTGGCTCACAGCCCCCCGTCCACGCTCGTATGGAAGAGCCAGAACAGCTGGGGCACGGGCGAGAGCTTCCGGACCATTGTGGTCAATGCTGACGGGGAGGAAGTGGCCATGAGAACCGTGAAGCAGTCCTCGGTGGTGCGGGAGGCCGAGAACGGGGAGGAGGGTGAGGACGAGGCGGCCGAGTTTGGAGAGGAGGATCTTTTCCATCAGCAGGGGGACCCGAGGACCACCTCTCGAGGCTGCCGCGTCATGTGA

Related Sequences

bmy_06684T0 SequenceType object (3)

Length: 570 aa      View alignments
>bmy_06684T0
PQVSGIKTLYEAELADARRVLDETARDRARLQIEIGKLRADLEEANKSAKKREGELTVAQGRVRDLESVFHQSEAELAAALSDKRTLENDVVELRAQLAKAEDGHAVAKKQLEKETLMRVDLENRCQSLQEELAFRKDAGAVSARLCPQEVRETRRRHEQRLVEVDSSRQQEYDFKMAQALEELRAQHDEQVRLYRLELEQTYQAKLDNAKLISDQNDKAASAAREELKEARMRVESLSYQLSGLQKQANAAEDRIRELEETVAGERDKFRKMLDAKEREMTEMRDVMQQQLAEYQELLDVKLALDMEISAYRKLLEGEEERLKLSPSPSSRITISRATSSSSGSSVSVSGRLGRSKRKRLEVQEPLGTGSSGTGLGSSGSSSFRLAQQASASGSISIEEIDLEGKFVQLKNSSDKVRPPPHPWGGPRVFSEPWANARPLCQDQSLGNWRIKRQILEGEEIAYKFTPKYVLRAGQTVTVWAAGAGVAHSPPSTLVWKSQNSWGTGESFRTIVVNADGEEVAMRTVKQSSVVREAENGEEGEDEAAEFGEEDLFHQQGDPRTTSRGCRVM*