Part of scaffold_254 (Scaffold)

For more information consult the page for scaffold_254 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SPATA20 ENSTTRG00000000215 (Bottlenosed dolphin)

Gene Details

spermatogenesis associated 20

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000000201, Bottlenosed dolphin)

Protein Percentage 93.41%
cDNA percentage 95.18%
Ka/Ks Ratio 0.29139 (Ka = 0.0347, Ks = 0.1192)

SPATA20 ENSBTAG00000004155 (Cow)

Gene Details

spermatogenesis-associated protein 20

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000005441, Cow)

Protein Percentage 95.04%
cDNA percentage 92.76%
Ka/Ks Ratio 0.09335 (Ka = 0.0283, Ks = 0.3033)

SPATA20  (Minke Whale)

Gene Details

spermatogenesis associated 20

External Links

Gene match (Identifier: BACU006436, Minke Whale)

Protein Percentage 96.22%
cDNA percentage 97.03%
Ka/Ks Ratio 0.33143 (Ka = 0.0221, Ks = 0.0667)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2370 bp    Location:421428..413572   Strand:-
>bmy_06711
ATGAGCCACCTTTCTTCACCCCCCCAAAAACACAAGGGGGAGCGCAAAGGCCACGGTCTCCCCCGTGGTTCAGAAAGAGGTAGCTCCTCCCGGGACAAGGACCGAAGCGTGACGGTCAGTAGTTCAGTGCCCATGCCGGCTGGAGGGAAGGGGAGCCGGACTAACTGCTGTCAGCCCACACCCCAGAAAGTCCCCAACCGCCTGATCAGTGAGAAGTCACCGTACCTCCTGCAACATGCCTACAACCCTGTGGACTGGTACCCCTGGGGGCAGGAAGCCTTCGACAAGGCCAGGAAAGAAAACAAGCCAATTTTCCTTTCAGTGGGGTACTCCACCTGCCACTGGTGCCACATGATGGAGGAGGAGTCCTTCCAGAATGAGGAGATTGGCCGCCTGCTCAGTGAGGACTTTGTCAGCGTGAAGGTTGACCGGGAAGAGCGGCCCGATGTGGACAAAGTGTATATGACCTTTGTGCAGGCCACCAGCAGTGGTGGGGGCTGGCCCATGAGTGTGTGGTTGACTCCCAACCTACAGCCCTTTGTGGGGGGCACCTATTTCCCCCCTGAGGATGGCTTGACCCGAGTTGGCTTCCGCACAGTGTTGATGAGGATACGGGAGCAGTGGAAACAGAACAAGAGTACCCTGCTGGAAAACAGCCAGCGTGTCACCGCAGCTCTGCTGGCCCGGTCGGAGATCAGCATGGGTGACCGCCAGCTGCCACCCTCCGCTGCCACCATGAACAGCCGCTGCTTCCAGCAACTGGACGAGGGCTATGATGAGGAGTATGGCGGCTTCGCCGAGGCCCCCAAGTTCCCCACGCCAGTGATCCTGAGCTTCCTGTTCTCCTACTGGCTCAGCCATCGGCTAACTCAGGATGGCTCTCGGGCCCAGCAGATGGCCTTGCACACCCTGAAGATGATGGCCAACGGGGGCATCCGAGACCATGTGGGGCAGGGCTTCCACCGCTACTCCACGGACCGCCAGTGGCACGTCCCCCACTTTGAGAAGATGCTGTATGACCAGGCACAGCTCGCGGTGGCCTATTCACAGGCCTTCCAGATCTCTGGTGATGAGTTCTACTCCGAAGTTGCCAAAGGCATCCTGCAGTACGTGGCTCGGAACCTGAGTCACCGGTCTGGAGGCTTCTACAGTGCAGAGGACGCGGACTCGCCCCCGGAGCGGGGCATGCGGCCCAAAGAGGGTGCCTTCTACGTGTGGACAGTCAAAGAGGTCCAGCAGCTCCTCCCCGAGCCCGTGCTGGGTGCCACCGAGCCTCTGACCTCGGGCCAGCTCCTCATGAAGCACTATGGACTCACGGAGGCCGGCAGCATCAGCCCCAGTCAGGACCCAAAGGGGGAGCTGCAGGGCCAGAACGTGCTGACCGTCCGGTATTCACTGGAGCTGACTGCTGCCCGCTTTGGCCTGGAAGTGGAGGCCGTACGGACCTTACTCAACTCAGGCCTCGAGAAGCTTTTCCAGGCCCGGAAACATCGGCCGAAGCCGCACCTGGACAGCAAGATGTTGGCGGCCTGGAATGGACTGATGGTGTCTGGCTTTGCCGTGACCGGGGCTGTCCTGGGCCAGGAGAGGCTGATCAACTACGCCATCAGTGGTGCCAAGTTCCTGAAGCGGCACATGTTTGATGTGGCCAGTGGCCGCCTAATGCGGACCTGCTATGCAGGCTCTGGGGGGACCGTGGAGCACAGCAACCCGCCCTGCTGGGGCTTCCTGGAGGACTACGCCTTCGTGGTGCGGGGCCTGCTGGACTTGTACGAGGCTTCACAGGAGAGCGCGTGGCTCGAGTGGGCTCTGCGGCTGCAGGACACGCAGGACAGGCTCTTCTGGGACTCCCAGGGTGGCGGCTACTTCTGCAGTGAGGCTGAGCTGGGGGCTGGCCTGCCCCTGCGTCTGAAGGACGACCAGGATGGTGCAGAGCCCAGCGCCAACTCCATGTCGGCCCATAACCTGCTTCGGCTGCACGGCTTCACAGGCCACAAGGACTGGATGGACAAGTGTGTGTGCCTGTTGACCGCCTTCTCTGAGCGCATGCGCCGTGTCCCCGTGGCGTTGCCTGAGATGGTCCGCGCCCTCTCAGCCCACCAGCAGACCCTCAAGCAGATCGTGATCTGTGGAGACCCCCAGGCCAAGGACACCAAGGCTCTGTTGCAGTGTGTCCACTCCATCTACATCCCTAACAAGGTGCTGATTCTGGCCGATGGGGACCCCTCAAGCTTCCTGTCCCGCCAGCTGCCCTTCCTGAGTACCCTGCGAAGGCTAGAAGACCAGGCCACTGCCTACGTGTGTGAGAACCAGGCCTGCTCGATGCCCATCACCGAGCCCTGTGAACTACGGAAACTGCTACATCAGTGA

Related Sequences

bmy_06711T0 Protein

Length: 790 aa      View alignments
>bmy_06711T0
MSHLSSPPQKHKGERKGHGLPRGSERGSSSRDKDRSVTVSSSVPMPAGGKGSRTNCCQPTPQKVPNRLISEKSPYLLQHAYNPVDWYPWGQEAFDKARKENKPIFLSVGYSTCHWCHMMEEESFQNEEIGRLLSEDFVSVKVDREERPDVDKVYMTFVQATSSGGGWPMSVWLTPNLQPFVGGTYFPPEDGLTRVGFRTVLMRIREQWKQNKSTLLENSQRVTAALLARSEISMGDRQLPPSAATMNSRCFQQLDEGYDEEYGGFAEAPKFPTPVILSFLFSYWLSHRLTQDGSRAQQMALHTLKMMANGGIRDHVGQGFHRYSTDRQWHVPHFEKMLYDQAQLAVAYSQAFQISGDEFYSEVAKGILQYVARNLSHRSGGFYSAEDADSPPERGMRPKEGAFYVWTVKEVQQLLPEPVLGATEPLTSGQLLMKHYGLTEAGSISPSQDPKGELQGQNVLTVRYSLELTAARFGLEVEAVRTLLNSGLEKLFQARKHRPKPHLDSKMLAAWNGLMVSGFAVTGAVLGQERLINYAISGAKFLKRHMFDVASGRLMRTCYAGSGGTVEHSNPPCWGFLEDYAFVVRGLLDLYEASQESAWLEWALRLQDTQDRLFWDSQGGGYFCSEAELGAGLPLRLKDDQDGAEPSANSMSAHNLLRLHGFTGHKDWMDKCVCLLTAFSERMRRVPVALPEMVRALSAHQQTLKQIVICGDPQAKDTKALLQCVHSIYIPNKVLILADGDPSSFLSRQLPFLSTLRRLEDQATAYVCENQACSMPITEPCELRKLLHQ*