Part of scaffold_254 (Scaffold)

For more information consult the page for scaffold_254 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CHAD ENSTTRG00000000211 (Bottlenosed dolphin)

Gene Details

chondroadherin

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000000196, Bottlenosed dolphin)

Protein Percentage 85.99%
cDNA percentage 88.61%
Ka/Ks Ratio 0.25553 (Ka = 0.09, Ks = 0.3521)

CHAD ENSBTAG00000021302 (Cow)

Gene Details

chondroadherin precursor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000028386, Cow)

Protein Percentage 86.27%
cDNA percentage 85.9%
Ka/Ks Ratio 0.12668 (Ka = 0.0882, Ks = 0.6959)

CHAD  (Minke Whale)

Gene Details

chondroadherin

External Links

Gene match (Identifier: BACU018342, Minke Whale)

Protein Percentage 87.68%
cDNA percentage 89.82%
Ka/Ks Ratio 0.29188 (Ka = 0.0824, Ks = 0.2823)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1182 bp    Location:483610..487732   Strand:+
>bmy_06716
ATGGCCCGCCCGATGCTCTTGCTCAGCCTCGGCCTCCTGGCCGGCCTGCTGCCGGCGCTGGCCGCCTGCCCCCAGAACTGCCACTGCCACGGTGACCTGCAGCACGTCATCTGCGACAAGGTGGGGCTGCAGAAGATCCCCAAGGTGTCAGAGAAGACCAAGCTGCTCAACCTACAGCGCAACAACTTCCCAGTGCTGGCTGCCAACTCGTTTCGGGCCATGCCGAACCTCGTGTCGCTGCACCTGCAGCACTGCCAGATCCGCGAGGTGGCCGCGGGCGCCTTCCGCGGCCTCAAGCAGCTCATCTACCTGTACCTGTCCCACAATGACATCCGCGTGCTGCGCACCGGCGCCTTCGACGACCTGACCGAGCTCACCTACCTCTACCTGGACCACAACAAGGTGACCGAGCTGCCCCGGGGGCTGCTCTCTCCGCTGGTCAACCTCTTCATCCTGCAGCTCAACAACAACAAGATCCGCGAGCTGCGCTCCGGCGCCTTCCACGGCGCCAAGGACCTGCGCTGGCTCTACCTGTCGGAAAACTCACTCAGTTCCCTGCAGCCCGGCACTCTGGATGACGTGGAGAACCTCGCCAAGTTCTACCTGGATAGGAACCAGCTGTCCAGCTACCCCTTGGCTGCTCTGAGCAAGCTGCGGGTGGTGGAGGATCTGAAGCTGTCCCACAATCCCCTGAAAAGCATTCCCGACAATGCCTTCCAGTCTTTCGGCAGATATCTGGAGACCCTCTGGCTGGACAACACCAACCTGGAGAAGTTCTCTGATGGTGCCTTCCTGGGTGTGACCACGCTGAAACATGTCCATCTGGAGAACAATCGCCTGAACCAGCTGCCTTCCAGCTTCCCCTTTGACAGCCTGGAGACCCTCACCCTCATCAACAACCCCTGGAAATGTGGCTGGAAGCCAAGACCTCCCGCCCTGATGCCACTTGCGTGTCGCCCGCCAAGTTCAGGGGCCAGCACATTCGTGACACGGACGCCTTCCGCGGCTGCAAGTTCCCCACTAAGAGGTCCAAGAAAGCCGGCCGCCATTAAACAGGTCCTGACCCAGCCGGTCCTGGTGACTGGTCTCTGCCTTCTGCCGGAGAAACTACTGATCCTCCCACCTCCGACCCCCACCTTCTCCCCACAGCCTTTGCTGATGCACAAAGCTGTCCACACCTAG

Related Sequences

bmy_06716T0 Protein

Length: 394 aa      View alignments
>bmy_06716T0
MARPMLLLSLGLLAGLLPALAACPQNCHCHGDLQHVICDKVGLQKIPKVSEKTKLLNLQRNNFPVLAANSFRAMPNLVSLHLQHCQIREVAAGAFRGLKQLIYLYLSHNDIRVLRTGAFDDLTELTYLYLDHNKVTELPRGLLSPLVNLFILQLNNNKIRELRSGAFHGAKDLRWLYLSENSLSSLQPGTLDDVENLAKFYLDRNQLSSYPLAALSKLRVVEDLKLSHNPLKSIPDNAFQSFGRYLETLWLDNTNLEKFSDGAFLGVTTLKHVHLENNRLNQLPSSFPFDSLETLTLINNPWKCGWKPRPPALMPLACRPPSSGASTFVTRTPSAAASSPLRGPRKPAAIKQVLTQPVLVTGLCLLPEKLLILPPPTPTFSPQPLLMHKAVHT*