Sequence detailsbmy_06723 (Coding sequence)

Part of scaffold_254 (SequenceType object (1))

For more information consult the page for scaffold_254 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

COL1A1ENSTTRG00000005467 (Bottlenosed dolphin)

Gene Details

collagen, type I, alpha 1

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000005185, Bottlenosed dolphin)

Protein Percentage 71.61%
cDNA percentage 76.4%
Ka/Ks Ratio 0.63792 (Ka = 0.1822, Ks = 0.2856)

COL1A1ENSBTAG00000013103 (Cow)

Gene Details

Collagen alpha-1(I) chain

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000017420, Cow)

Protein Percentage 77.65%
cDNA percentage 81.5%
Ka/Ks Ratio 0.4982 (Ka = 0.1769, Ks = 0.355)

Genome Location

Sequence SequenceType object (2)

Length: 4773 bp    Location:687568..704474   Strand:+
Raw sequence 
>bmy_06723
ATGTTCAGCTTTGTGGACCTCCGGCTCCTGCTCCTCTTAGCGGCCACCGCCCTCCTGACGCACGGCCAAGAGGAGGGCCAAGAAGAAGGCCAAGAAGAAGACATCCCACCAGTCACCTGCGTACAGAACGGCCTCAGGTACCATGACCGAGACGTGTGGAAACCCGTGCCCTGCCAGATCTGTGTCTGCGACAACGGCAACGTGTTGTGCGATGACGTGATCTGCGACGAAATCAAGAACTGTCCCAACGCCAAAGTCCCCGCGGGCGAGTGCTGCCCCGTCTGCCCCGAAGGCGAGGCGTCACCCACGGACCAAGAAACCACTGGAGTCGAGGGACCCAAAGGAGACACTGGCCCCCGAGGCCCAAGGGGACCCGCTGGCCCCCCTGGCCGAGATGGCATTCCTGGACAACCTGGACTTCCCGGACCCCCCGGACCCCCAGGACCTCCCGGACCCCCTGGCCTCGGAGGAAACTTTGCTCCCCAGATGTCTTACGGCTATGATGAGAAATCAACAGGAATTTCTGTGCCTGGCCCCATGGGTCCTTCTGGTCCTCGTGGTCTCCCTGGCCCCCCTGGCGCACCTGGTCCCCAAGGTTTCCAAGGCCCCCCTGGTGAGCCTGGCGAGCCTGGAGCCTCAGGTCCCATGGGTCCCCGTGGTCCCCCTGGCCCCCCTGGCAAGAACGGAGATGATGGTGAAGCTGGAAAGCCTGGTCGTCCTGGTGAGCGCGGGCCTCCTGGACCTCAGGGTGCTCGGGGATTGCCCGGAACAGCTGGCCTCCCTGGAATGAAGGGACACAGAGGTTTCAGTGGTTTGGATGGTGCCAAGGGAGATGCTGGTCCTGCTGGTCCCAAGGGTGAGCCTGGTAGCCCTGGTGAAAATGGAGCTCCTGGTCAGATGGGCCCCCGTGGTCTGCCTGGTGAGAGAGGTCGCCCTGGAGCCCCTGGCCCTGCTGGTGCTCGTGGAAATGATGGTGCTACTGGTGCTGCTGGACCCCCTGGTTCCACTGGCCCCGCTGGTCCTCCTGGTTTCCCTGGTGCTGTTGGTGCTAAGGGTGAATCTGGTCCCCAAGGATCCCGAGGCTCTGAAGGTCCCCAAGGTGTGCGTGGTGAGCCCGGGCCCCCTGGCCCTGCTGGTGCTACTGGCCCTGCTGGAAACCCTGGTACTGATGGACAGCCTGGTGCTAAAGGTGCCAATGGCGCTCCTGGTATTGCTGGTGCTCCTGGCTTCCCTGGTGCCCGAGGCCCCTCTGGACCCCAGGGTCCCAGTGGCCCCCCTGGTCCCAAGGGTAACAGCGGTGAACCTGGTGCCCCTGGCAACAAAGGAGACACTGGCGCCAAGGGAGAGCCCGTAAGTCCCCCAGCAGCCCCTTGGGGGAGGTCCAAGGAGGAATGGGAGCCCCTGGTGCTGGACAGCCAGCCTCAAGCCTGCTCTGGAGCTGGTACCAGGACAGCCCCTCACCACAGGCTGCCCCCTCCTCTCTGCCCTCTCCAGGGCCCCACTGGTATTCAAGGCCCCCCTGGCCCTGCTGGGGAAGAAGGAAAGCGAGGAACCCGAGGTGAACCCGGACCTGCTGGCCTGCCTGGACCCCCTGGCGAGCGTGGTGGACCTGGTAGCCGCGGTTTCCCTGGCGCAGATGGTGTTTCTGGTCCCAAGGGTCCCGCTGGTGAGCGTGGTGCTCCTGGCCCTGCTGGCCCCAAAGGTTCTCCTGGTGAAGGTGGTCGCCCCGGTGAAGCTGGTCTGCCTGGTGCCAAGGGTCTGACTGGAAGCCCTGGCAGCCCTGGTCCTGATGGCAAAACTGGCCCCCCTGGTCCTGCTGGTCAAGATGGCCGCCCCGGACCCCCAGGCCCTCCTGGTAGCCGTGGTCAAGCCGGTGTGATGGGTTTCCCTGGGCCTAAAGGTGCTGCTGGAGAACCCGGCAAGGCTGGAGAACGAGGTGTTCCTGGACCCCCCGGCGCTGCTGGTGCTGCTGGCAAAGACGGAGAAACTGGAGCTCAGGGACCTCCCGGACCTGCTGTGAGTGTCCCTGATGGGGAGGCCTGGGGTGGGGGTGCTGTGGGGCAGGAAAGGGGAGATAGCCCCCGTCCCCCTTCTCCTGAGCTTTCCCATGACCGCGGCATTTCCTCCGTGCAGGGCCCTGCTGGTGAGAGAGGTGAACAAGGCCCTGCTGGCTCCCCCGGATTCCAGGGTCTCCCTGGCCCTGCTGGTCCTCCTGGTGAAGCAGGCAAACCCGGTGAACAGGGTGTTCCTGGAGACATTGGTGCCCCCGGCCCCTCTGGAGCAAGAGGCGAGAGAGGTTTCCCCGGCGAGCGTGGTGTGCAAGGGCCCTCCGGTCCTGCAGGTCCCCGTGGGTCCAACGGTGCCCCTGGCAATGACGGTGCTAAGGGTGATGCTGGTGCCCCTGGAGCCCCTGGTAACCAGGGCGCCCCTGGCCTTCAAGGAATGCCTGGTGAACGAGGTGCAGCAGGTCTCCCAGGCCCTAAGGGTGACAGAGGCGATGTTGGTCCCAAAGGTGCTGATGGTGCTCCTGGCAAAGATGGCGTCCGTGGTCTGACTGGTCCCATTGGTCCTCCTGGCCCCGCTGGTGCCCCTGGTGACAAGGGTGAAACTGGTCCTAGCGGCCCTGCTGGTCCCACTGGAGCTCGTGGTGCCCCCTCCATCCCATCCCACCTTCCCCCAGATCAGGGCATCTCTCCATTTGCCTCCTTTTCTTCTAGGGAGACCGTGGTGAGCCTGGTCCCCCCGGCCCTGCTGGCTTCGCTGGCCCCCCTGGTGCTGATGGCCAACCTGGTGCTAAAGGTGAACCTGGTGATGCTGGTGCTAAAGGCGATGCTGGTCTCCCCGGAGCTGCTGGACCCACTGGACCTCCTGGCCCCATTGGTAACGTTGGTGCTCCTGGACCCAAAGGTGCTCGTGGCAGCGCTGGTCCCCCTGGTGCTACTGGTTTCCCTGGTGCTGCTGGCCGAGTCGGTCCCCCTGGGCCCTCTGGAAATGCTGGACCCCCTGGACCTTCTGGCCCTGCTGGCAAAGAAGGCAGCAAAGGTCCCCGTGGTGAGACTGGCCCCGCTGGGCGTGCTGGTGAAGTCGGTCCTCCCGGTCCCCCTGGCCCCGCTGGTGAGAAAGGATCCCCTGGTACTGATGGACCTGCTGGTGCTCCCGGCTCTCCCGGACCTCAGGGTATTGCTGGACAGCGTGGCGTGGTCGGCCTGCCCGGTCAGCGAGGAGAAAGAGGCTTCCCTGGTCTTCCTGGCCCCTCTGGTGAACCCGGCAAACAAGGTCCTTCTGGAGCAAGTGGTGAACGTGGCCCCCCTGGTCCCATGGGCCCCCCTGGATTGGCTGGACCCCCTGGCGAGTCTGGACGTGAAGGAGCCCCTGGTGCTGAAGGATCCCCTGGACGAGATGGTTCTCCGGGCCCCAAGGGTGACCGTGGTGAGAGCGGCCCTGCTGGACCCCCTGGTGCTCCTGGTGCTCCTGGTGCCCCCGGCCCCGTCGGCCCTGCTGGCAAGAGCGGCGATCGTGGTGAGACTGGTCCCGCTGGTCCTGCTGGTCCCATTGGCCCCGTTGGTGCCCGCGGCCCCACTGGACCCCAAGGCCCCCGTGGTGACAAGGGTGAGACAGGCGAACAGGGCGACAGAGGCATTAAGGGTCACCGTGGCTTCTCTGGTCTCCAGGGTCCCCCTGGCCCTCCTGGCTCTCCTGGTGAGCAAGGTCCCTCCGGAGCTTCTGGTCCTGCTGGTCCCCGCAGCTGGGGTGGGCCCGTGCTTTCTGGCAGGCTTTCTCCAACCAGCTTCCTCCCTGCAGGGTCCCCCTGGCTCTGCTGGTACTCCTGGCAAAGATGGACTCAACGGTCTCCCAGGCCCCATCGGTCCCCCTGGTCCTCGTGGTCGCACTGGTGATGCTGGTCCTGCTGGTCCCCCCGGCCCTCCTGGACCCCCTGGTCCCCCTGGTCCTCCCAGCGCTGGTTACGACTTCAGCTTCCTGCCCCAGCCACCTCAAGAGAAGGCTCAGGATGGTGGCCGCTACTACCGGGCCGATGACGCCAATGTGGTCCGTGACCGTGACCTCGAGGTGGACACCACTCTCAAGAGCCTGAGCCAGCAGATCGAGAACATCCGAAGCCCTGAAGGCAGCCGCAAGAACCCTGCCCGCACCTGCCGTGACCTCAAGATGTGCCACTCCGACTGGAAGAGCGGAGAATACTGGATCGACCCCAACCAAGGCTGCAACCTGGATGCCATTAAGGTCTTCTGCAACATGGAGACAGGTGAGACCTGCGTGTATCCCACTCAGCCCAGCGTGGCCCAGAAGAACTGGTACATCAGCAAGAACCCCAAGGACAAGAAGCACGTCTGGTACGGCGAGAGCATGACCGGCGGATTCCAGTTCGAGTACGGCGGCCAGGGCTCCGATCCTGCCGATGTGGCCATCCAGCTGACTTTCCTGCGCCTGATGTCCACCGAGGCCTCCCAGAACATCACCTACCACTGCAAGAACAGCGTGGCCTACATGGACCAGCAGACTGGCAACCTCAAGAAGGCCCTGCTCCTCCAGGGCTCCAACGAGATTGAGATCCGGGCCGAGGGCAACAGCCGCTTCACCTACAGCGTCACCTACGACGGCTGCACGAGTCACACCGGAGCCTGGGGCAAGACAGTGATCGAATACAAAACCACCAAGACCTCCCGCTTGCCCATCATCGATGTGGCCCCCTTGGACGTTGGCGCCCCAGACCAGGAATTCGGCATCGACGTTGGCCCTGTCTGCTTCCTGTAA

Related Sequences

bmy_06723T0 SequenceType object (3)

Length: 1591 aa      View alignments
>bmy_06723T0
MFSFVDLRLLLLLAATALLTHGQEEGQEEGQEEDIPPVTCVQNGLRYHDRDVWKPVPCQICVCDNGNVLCDDVICDEIKNCPNAKVPAGECCPVCPEGEASPTDQETTGVEGPKGDTGPRGPRGPAGPPGRDGIPGQPGLPGPPGPPGPPGPPGLGGNFAPQMSYGYDEKSTGISVPGPMGPSGPRGLPGPPGAPGPQGFQGPPGEPGEPGASGPMGPRGPPGPPGKNGDDGEAGKPGRPGERGPPGPQGARGLPGTAGLPGMKGHRGFSGLDGAKGDAGPAGPKGEPGSPGENGAPGQMGPRGLPGERGRPGAPGPAGARGNDGATGAAGPPGSTGPAGPPGFPGAVGAKGESGPQGSRGSEGPQGVRGEPGPPGPAGATGPAGNPGTDGQPGAKGANGAPGIAGAPGFPGARGPSGPQGPSGPPGPKGNSGEPGAPGNKGDTGAKGEPVSPPAAPWGRSKEEWEPLVLDSQPQACSGAGTRTAPHHRLPPPLCPLQGPTGIQGPPGPAGEEGKRGTRGEPGPAGLPGPPGERGGPGSRGFPGADGVSGPKGPAGERGAPGPAGPKGSPGEGGRPGEAGLPGAKGLTGSPGSPGPDGKTGPPGPAGQDGRPGPPGPPGSRGQAGVMGFPGPKGAAGEPGKAGERGVPGPPGAAGAAGKDGETGAQGPPGPAVSVPDGEAWGGGAVGQERGDSPRPPSPELSHDRGISSVQGPAGERGEQGPAGSPGFQGLPGPAGPPGEAGKPGEQGVPGDIGAPGPSGARGERGFPGERGVQGPSGPAGPRGSNGAPGNDGAKGDAGAPGAPGNQGAPGLQGMPGERGAAGLPGPKGDRGDVGPKGADGAPGKDGVRGLTGPIGPPGPAGAPGDKGETGPSGPAGPTGARGAPSIPSHLPPDQGISPFASFSSRETVVSLVPPALLASLAPLVLMANLVLKVNLVMLVLKAMLVSPELLDPLDLLAPLVTLVLLDPKVLVAALVPLVLLVSLVLLAESVPLGPLEMLDPLDLLALLAKKAAKVPVVRLAPLGVLVKSVLPVPLAPLVRKDPLVLMDLLVLPALPDLRVLLDSVAWSACPVSEEKEASLVFLAPLVNPANKVLLEQVVNVAPLVPWAPLDWLDPLASLDVKEPLVLKDPLDEMVLRAPRVTVVRAALLDPLVLLVLLVPPAPSALLARAAIVVRLVPLVLLVPLAPLVPAAPLDPKAPVVTRVRQANRATEALRVTVASLVSRVPLALLALLVSKVPPELLVLLVPAAGVGPCFLAGFLQPASSLQGPPGSAGTPGKDGLNGLPGPIGPPGPRGRTGDAGPAGPPGPPGPPGPPGPPSAGYDFSFLPQPPQEKAQDGGRYYRADDANVVRDRDLEVDTTLKSLSQQIENIRSPEGSRKNPARTCRDLKMCHSDWKSGEYWIDPNQGCNLDAIKVFCNMETGETCVYPTQPSVAQKNWYISKNPKDKKHVWYGESMTGGFQFEYGGQGSDPADVAIQLTFLRLMSTEASQNITYHCKNSVAYMDQQTGNLKKALLLQGSNEIEIRAEGNSRFTYSVTYDGCTSHTGAWGKTVIEYKTTKTSRLPIIDVAPLDVGAPDQEFGIDVGPVCFL*