Sequence detailsbmy_06739 (Coding sequence)

Part of scaffold_254 (SequenceType object (1))

For more information consult the page for scaffold_254 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

NGFRENSTTRG00000007987 (Bottlenosed dolphin)

Gene Details

nerve growth factor receptor

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000007552, Bottlenosed dolphin)

Protein Percentage 93.91%
cDNA percentage 94.69%
Ka/Ks Ratio 0.18462 (Ka = 0.0334, Ks = 0.1812)

NGFRENSBTAG00000020979 (Cow)

Gene Details

tumor necrosis factor receptor superfamily member 16 precursor

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000027940, Cow)

Protein Percentage 92.77%
cDNA percentage 91.45%
Ka/Ks Ratio 0.0966 (Ka = 0.0401, Ks = 0.4149)

NGFR (Minke Whale)

Gene Details

nerve growth factor receptor

External Links

Gene match (Identifier: BACU006413, Minke Whale)

Protein Percentage 95.08%
cDNA percentage 96.02%
Ka/Ks Ratio 0.25735 (Ka = 0.0286, Ks = 0.1112)

Additional orthologs identified in other species via the OPTIC pipeline.

NGFR (Human)   Ngfr (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1308 bp    Location:1287589..1274953   Strand:-
Raw sequence 
>bmy_06739
ATGACTGGCTGGTCATTTGCTTTGGCCCTGAGCTGTCTCCATCTCTATCGGTCTAGAGAGATGAAGACTCAGAGCGGGAAAGCAGAGAAGGTGTCCCTTGGAGATGCCAAGGAGGTGTGCCCCACGGGCCTGTACACCCACAGCGGTGAGTGCTGCAAAGCCTGCAACCTGGGCGAGGGCGTGGCCCAGCCTTGCGGAGCCAACCAGACCGTGTGTGAGCCCTGCCTGGACAGCGTGACCTTCTCGGACGTGGTGAGCGCCACGGAGCCGTGTAAGCCGTGCACCGAGTGCGTGGGGCTGCAGAGCATGTCGGCGCCCTGCGTGGAGGCCGACGACGCCGTGTGCCGCTGCGCCTACGGCTACTACCAGGACGAGACGACGGGCCGCTGCGAGGCGTGCCGCGTGTGCGAGGCGGGCTCGGGGCTCGTGTTCTCGTGCCAGGACAAGCAGAACACCGTGTGCGAGGAGTGCCCCGACGGCACATACTCCGACGAGGCCAACCACGTGGACCCGTGCCTGCCCTGCACGGTGTGTGAGGACACTGAGCGCCAGCTGCGCGAGTGCACGCGCTGGGCCGACGCCGAGTGTGAGGAGATCCCTGGCCGTTGGATTACACGGGCCACGCCCCCGGAGGGCTCAGACAGCACAGACCCCAGCACCCAGGAGCCTGAGGTACCTCCAGATCAAGATCTCGTAACCAGCACGGTGTCAGATGTGGTGACCACAGTGATGGGCAGCTCCCAGCCCGTGGTGACCCGAGGTACCACCGACAACCTCATCCCTGTCTATTGCTCCATCCTGGCTGCTGTGGTTGTGGGCCTCGTGGCCTACATCGCCTTCAAGAGGTGGAACAGCTGCAAGCAGAACAAGCAAGGAGCCAACAGCCGGCCCGTGAACCAGACGCCCCCACCCGAGGGAGAAAAACTGCACAGCGACAGCGGCATCTCTGTGGACAGCCAGAGCCTGCATGACCAGCAGTCCCATACACAGACAGCTGCAGGCCAGGCCCTCAAGGGTGACGGAGGCCTCTACAGCAGCCTGCCGCTGGCCAAGCGGGAGGAGGTGGAGAAGCTGCTCAGTGGCTCTGCGGGGGACACCTGGCGGCATCTGGCCGGTGAGCTGGGTTACCAGCCTGAGCACATAGACTCCTTCACCCAGGAGGCCTGCCCGGTCCGCGCCCTGCTGGCCAGCTGGGCCACCCAGGACAGCGCCACACTTGACACCCTCCTGGCTGCCCTGCGCCGCATCCAGCGAGCCGACATTGTGGAGAGCCTGTGCAGCGAGTCCACGGCCACGTCCCCGGTGTGA

Related Sequences

bmy_06739T0 SequenceType object (3)

Length: 436 aa      View alignments
>bmy_06739T0
MTGWSFALALSCLHLYRSREMKTQSGKAEKVSLGDAKEVCPTGLYTHSGECCKACNLGEGVAQPCGANQTVCEPCLDSVTFSDVVSATEPCKPCTECVGLQSMSAPCVEADDAVCRCAYGYYQDETTGRCEACRVCEAGSGLVFSCQDKQNTVCEECPDGTYSDEANHVDPCLPCTVCEDTERQLRECTRWADAECEEIPGRWITRATPPEGSDSTDPSTQEPEVPPDQDLVTSTVSDVVTTVMGSSQPVVTRGTTDNLIPVYCSILAAVVVGLVAYIAFKRWNSCKQNKQGANSRPVNQTPPPEGEKLHSDSGISVDSQSLHDQQSHTQTAAGQALKGDGGLYSSLPLAKREEVEKLLSGSAGDTWRHLAGELGYQPEHIDSFTQEACPVRALLASWATQDSATLDTLLAALRRIQRADIVESLCSESTATSPV*