Part of scaffold_255 (Scaffold)

For more information consult the page for scaffold_255 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

IRF8 ENSTTRG00000016024 (Bottlenosed dolphin)

Gene Details

interferon regulatory factor 8

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000015187, Bottlenosed dolphin)

Protein Percentage 62.94%
cDNA percentage 63.4%
Ka/Ks Ratio 0.21566 (Ka = 0.013, Ks = 0.0603)

IRF8 ENSBTAG00000017824 (Cow)

Gene Details

interferon regulatory factor 8

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000023694, Cow)

Protein Percentage 92.96%
cDNA percentage 90.06%
Ka/Ks Ratio 0.05304 (Ka = 0.0332, Ks = 0.6251)

IRF8  (Minke Whale)

Gene Details

interferon regulatory factor 8

External Links

Gene match (Identifier: BACU004319, Minke Whale)

Protein Percentage 98.32%
cDNA percentage 98.51%
Ka/Ks Ratio 0.19814 (Ka = 0.0085, Ks = 0.0427)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1284 bp    Location:212272..230637   Strand:+
>bmy_06747
ATGTGTGACCGCAGCGGCGGCCGGCGGCTGCGGCAGTGGCTGATAGAGCAGATCGATAGCGCCGGGTACCCCGGGCTGGTCTGGGAGAGCGACGAGAAGAGCATGTTCCGGATCCCTTGGAAGCACGCTGGCAAGCAGGATTACAACCAGGAAGTGGATGCCTCCATCTTCAAGGCCTGGGCCGTTTTTAAAGGGAAGTTTAAGGAAGGGGACAAGGCCGAGCCGGCCACATGGAAGACGAGGTTACGCTGTGCTTTGAACAAGAGCCCGGATTTTGAGGAAGTGACAGACCGGTCCCAGCTGGACATTTCTGAACCGTATAAAGTTTACCGAATCGTCCCCGAGGAGGAGCAAAAATGCAAATTAGGCGTGGTGGCTCCCGGCTGCATTAGTGAAGCCACAGAGATGGAGTGCGGTCGCTCCGAAATCGACGAGCTGATCAAGGAGCCTCCCGTGGACGATTACATGGGGATGGTCAAAAGGAGCCCCTCCCCGCCCGAAGCCTGCAGGAGTCAGCTCCTCCCAGACTGGTGGATGCAGCAGCCCAGCGCAGCAGGCCTGCCGCTGGTGCCAGGGTACAGCACCTACGACGCGCACCACGCAGCCTTCTCCCAGATGGTCATCAGCTTCTACTACGGGGGCAAGCTGGTGGGCCAGACCACCACCACGTGCCCCGAGGGCTGCCGCCTGTCCCTGGGCCAGCCCGGCCTGCCCGGCGGCAAGCTGTGTGGGCCCGAGGGCCTGGAGCTGGTGCGCTTCCCGCCGGCCGACGCCATCCCCAGTGAGCGGCAGCGGCAGGTGACACGGAAGCTGTTCGGGCACCTGGAGCGCGGCGTCCTCCTGCACAGCAGCCGGCAGGGCGTGCTGGTCAAGCGGCTGTGCCAGGGCCGCGTGTTCTACAGYGGCAACGCCGCGGCGGGCAGGGGCGGCCCCAACAAGCTGGAGCGTGACGAGGTGGTCAAGGTCTTCGACACCAGCCAGTTCTTCCGAGAGCTGCAGCAGTTCTACAACAGCCAGAGCCGGCTTCCCGACAGCAGGGTGGTGCTGTGCTTCGGAGAGGAGTTTCCAGATATGACCCCCTTGCGCTCCAAGCTCATTCTCGTGCAGATCGAGCAGCTCTACGTCCGACAGCTGGTGGAAGAGGCTGGGAAGAGCTGCAGTGCCGGCTCCATGATGCAGGCTCCCGAGGAGCCCCCGCCAGACCAGGTCTTCCGCATGTTTCCAGATATTTGCGCCTCACACCAGAGACCTTTTTTCAGAGAAAACCAACAGATCACAGTTTAA

Related Sequences

bmy_06747T0 Protein

Length: 428 aa      View alignments
>bmy_06747T0
MCDRSGGRRLRQWLIEQIDSAGYPGLVWESDEKSMFRIPWKHAGKQDYNQEVDASIFKAWAVFKGKFKEGDKAEPATWKTRLRCALNKSPDFEEVTDRSQLDISEPYKVYRIVPEEEQKCKLGVVAPGCISEATEMECGRSEIDELIKEPPVDDYMGMVKRSPSPPEACRSQLLPDWWMQQPSAAGLPLVPGYSTYDAHHAAFSQMVISFYYGGKLVGQTTTTCPEGCRLSLGQPGLPGGKLCGPEGLELVRFPPADAIPSERQRQVTRKLFGHLERGVLLHSSRQGVLVKRLCQGRVFYSGNAAAGRGGPNKLERDEVVKVFDTSQFFRELQQFYNSQSRLPDSRVVLCFGEEFPDMTPLRSKLILVQIEQLYVRQLVEEAGKSCSAGSMMQAPEEPPPDQVFRMFPDICASHQRPFFRENQQITV*