Part of scaffold_255 (Scaffold)

For more information consult the page for scaffold_255 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

ENSTTRG00000008821 (Bottlenosed dolphin)

Gene Details

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000008355, Bottlenosed dolphin)

Protein Percentage 72.97%
cDNA percentage 78.38%
Ka/Ks Ratio 0.92781 (Ka = 0.2592, Ks = 0.2794)

MAP1LC3B ENSBTAG00000011632 (Cow)

Gene Details

Microtubule-associated proteins 1A/1B light chain 3B

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000015449, Cow)

Protein Percentage 72.97%
cDNA percentage 76.88%
Ka/Ks Ratio 0.64655 (Ka = 0.2559, Ks = 0.3958)

MAP1LC3B  (Minke Whale)

Gene Details

microtubule-associated protein 1 light chain 3 beta

External Links

Gene match (Identifier: BACU019500, Minke Whale)

Protein Percentage 67.59%
cDNA percentage 74.07%
Ka/Ks Ratio 0.56977 (Ka = 0.2853, Ks = 0.5007)

Genome Location

Sequence Coding sequence

Length: 540 bp    Location:1345264..1351632   Strand:+
>bmy_06755
CAAAGAGTAGAAGATGTCCGACTTATCCGAGAGCAGCATCCTACCAAAATCCCGGTAATAATAGAACGATACAAAGGTGAGAAGCAGCTTCCAGTCCTGGATAAAACAAAGTTCCTGGTGCCTGATCATGTCAACATGAGTGAGCTCATCAAGATAATTAGAAGGCGCTTACAGCTCAACGCTAATCAAGCCTTCTTCCTGTTAGTGAATGGACATAGCATGTACAAACAGCAGATGTGCACGTGCCCTCCACCCTCAGAGGCCCTGGAAGTGACCAGAGGGGCTGCTAGCAGGTGCCAGGAGTGGCCAGCTGTGTCTCCTGATGCTACTTACCTGACGGGCCCTGACCAGTCCGAGAACCGTGTGCACGTTTTCCTCCGGGTAACCACAGGTCTGACGACAAGACCAAGAGAAAATGGGGACGCCTGCTGGAGAAAAAGCCCCAGAATTCTCCCTCTGGGGCCTGGCACTGCTCAGGATAGCACCGCAGTCCTGGGCGAGCACAGCACCAGCCCAAGTCCAGAGAGGACGTGGCCTTAG

Related Sequences

bmy_06755T0 Protein

Length: 180 aa      View alignments
>bmy_06755T0
QRVEDVRLIREQHPTKIPVIIERYKGEKQLPVLDKTKFLVPDHVNMSELIKIIRRRLQLNANQAFFLLVNGHSMYKQQMCTCPPPSEALEVTRGAASRCQEWPAVSPDATYLTGPDQSENRVHVFLRVTTGLTTRPRENGDACWRKSPRILPLGPGTAQDSTAVLGEHSTSPSPERTWP*