Part of scaffold_267 (Scaffold)

For more information consult the page for scaffold_267 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SLC6A12 ENSTTRG00000008843 (Bottlenosed dolphin)

Gene Details

solute carrier family 6 (neurotransmitter transporter, betaine/GABA), member 12

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000008382, Bottlenosed dolphin)

Protein Percentage 91.81%
cDNA percentage 92.99%
Ka/Ks Ratio 0.17048 (Ka = 0.018, Ks = 0.1056)

SLC6A12 ENSBTAG00000038415 (Cow)

Gene Details

sodium- and chloride-dependent betaine transporter

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000040420, Cow)

Protein Percentage 86.41%
cDNA percentage 90.34%
Ka/Ks Ratio 0.1947 (Ka = 0.0679, Ks = 0.3487)

SLC6A12  (Minke Whale)

Gene Details

solute carrier family 6 (neurotransmitter transporter), member 12

External Links

Gene match (Identifier: BACU003122, Minke Whale)

Protein Percentage 92.19%
cDNA percentage 94.86%
Ka/Ks Ratio 0.38259 (Ka = 0.0443, Ks = 0.1158)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 3081 bp    Location:959713..896200   Strand:-
>bmy_06801
ATGGATAGCAGGGTCTCGAGCACAACCAGTAATGGAGAGACAAAACCAATGTGCCCAGGCCTGGAAAAGGCGGAGGAGGCTGGCGCCCTGCAGCGGGGCCAGTGGAGCAACAAGCTGGAGTTCGTGCTGGCCGTGGCCGGCGAGATCATCGGGCTGGGCAACGTCTGGAGGTTTCCCTACCTCTGCTACAAAAACGGGGGAGGTGCCTTTTTCATCCCCTACCTCATCTTCCTCTTTACCTGTGGCATTCCTGTCTTTCTCCTGGAGACAGCACTGGGCCAGTACACCAGCCAGGGGGGCATCACAGCCTGGAGGAAGATCTGCCCCATCTTTGAGGGTATCGGCTATGCCTCCCAGACCATTGTGATCCTCCTCAACATCTACTACATCATCGTCCTGGCCTGGGCCCTCTTCTACCTCTTCAGCAGCTTCACCATCGACCTGCCCTGGGGGAGCTGCCGCCACGACTGGAACACAGAGCATTGCGTGGAGTTCCAGAGGCCCAGCAGCTCCGTGAACGTGAGCTCCGAGAACGCCACCTCTCCCGTCATCGAGTTCTGGGAGAGGCGGGTCCTGAAGATCTCGGACGGCATCCAGCACCTGGGAGCCCTGCGCTGGGAGCTGGCCCTGTGCCTCCTGCTCGCCTGGGTCATCTGCTACTTCTGCATCTGGAAGGGGGTCAAGTCCACGGGCAAGGTGGTGTACTTCACAGCCACCTTCCCTTACCTCATGCTGGTGGTCCTGTTGATTCGAGGGGTGACGCTGCCTGGGGCCGCCCAAGGAATTCAGTTTTACCTGTACCCAAACCTCACGCGTCTGTGGGACCCCCAGGTGTGGATGGACGCAGGCACCCAGATCTTCTTCTCCTTCGCCATCTGCCTAGGGTGCCTGACGGCCCTGGGCAGCTACAACAAGTACCACAACAACTGCTACAGGGACTGCCTCGCCCTCTGCTTCCTCAACAGCGGCACCAGCTTCGTGGCCGGGTTTGCCATCTTCTCCATCCTGGGCTTCATGTCCCAGGAGCAGGGGGTGCCCATCTCTGAGGTGGCCGAGTCAGGCCCTGGTCTGGCCTTCATCGCCTACCCCCGGGCTGTGGTGATGCTGCCCTTCTCGCCCCTCTGGGCCTGCTGCTTCTTCTTCATGATCGTCCTCCTGGGACTGGATAGCCAGTTTGTGTGTGTGGAAAGCCTGGTGACGGCGCTGGTGGACATGTACCCCAGTGTATTCCGCAAGAAGAACCGGAGGGAGGTCCTCATCCTGGGGGTGTCTGTCACCTCCTTCCTCGTCGGGCTGGTCATGCTCACAGAGGGCGGTATGTACATTTTCCAGCTCTTTGACTACTACGCAGCCAGTGGCATGTGCCTTCTGTTCGTGGCCATCTTTGAGTCCCTCTGTGTGGCGTGGGCCTACGGAGCTGGGCGCTTCTATGACAACATTGAAGACATGATTGGCCCGTCCATGGCTGCAGACGACAGAAAAGTGGCAGTTCCCAAGGATGGGCCTTCTGTGGTCTCCTGGGTCCCTGAGGAGGGAGAGAAGTTGGACCAGGAAGGCAAGGACCAGGTGAAGGAGCGGGGCCAGTGGAGCAACAAGCTGGAGTTCGTGCTGTCCGTGGCCGGCGAGATCATCGGGCTGGGCAACGTCTGGAGGTTTCCCTACCTCTGCTACAAAAACGGGGGAGGAGCCTTCTTCTTCCCCTACTTCATCTTCTTCTTCACCTGCGGCATCCCAGTGTTCTTCCTGGAAGTGGCGCTGGGCCAGTACACCAGCCAGGGCAGCGTCACAGCCTGGAGGAAGATCTGCCCCCTCCTCCAGGGCATTGGCCTGGCGTCTGTGGTCATCGAGGCCTATCTGAACGTCTACTACATCATCATCCTCGCCTGGGCCCTCTTCTACCTGTTCAGCTCCTTTACCTCCGAGCTGCCCTGGACCGCCTGCACCCACTCCTGGAACACAGAGGACTGCGTGGACTTCCTGAACCGCTCGGCAGCCAGCGCAGCGGCCCCGCCCGTGAACTTCACCTCCCCCGTCATGGAATTCTGGGAGAGACGTGTTCTGGGCATCAGCTCCGGCATCCACGAACTGGGGGCCCTGCGCTGGGAGCTGGCCCTCTGCCTCCTGCTTGCCTGGGTCGTCTGCTACTTCTGCATCTGGAAGGGGGTCAAGTCCACGGGCAAGGTTGTCTACTTCACAGCCACGTTCCCCTACCTGATGCTGGTCATCCTACTGATCCGAGGCATCACCCTGCCCGGAGCCTACGAGGGCATCATCTACTACCTGAAACCAGATTTGCTTCGGCTCAAGGACCCCCAGGTGTGGATGGACGCGGGCACCCAGATCTTCTTCTCCTTCGCTATCTGCCAGGGGTGCCTGACGGCCCTGGGCAGCTACAACAAGTACCACAACAACTGCTACAGGGACAGCATCGCCCTCTGCTTTCTGAACAGCGCCACCAGCTTCGTGGCGGGGTTTGTGGTCTTCTCCATCCTGGGCTTCATGTCCCAGGAGCAGGGGGTGCCCATCTCTGAGGTGGCCGAGTCAGCCCCCTCCGGCCCACAGTTTGTCTGTGTGGAGTGCCTGGTGACAGCCTCCGTGGACATGTTCCCCAGGCAGCTCCGGAAGAGCGGGCGGCGGGAGCTCCTGATCCTCGCCATCGCGGTCATGTGCTACCTGATCGGGCTCTTCCTGGTCACCGAGGGCGGGATGTACATCTTCCAGCTGTTTGATTATTACGCCTGCAGTGGCACGTGCCTGCTGTTCCTTTCCGTGTTTGAAGTGATCTGCATCGGCTGGGTGTATGGGGCCGACCGTTTCTATGACAACATGGAGGACATGTTTGGCTACCGGCCGTGGCCCCTGGTGAAGATCTCCTGGCTCTTCCTGACCCCGGGCCTTTGCCTGGCCACTTTCCTCTTCTCCTTGAGCAAGTACACACCTCTCAGATACAACAACGTCTACGTGTACCCGGCCTGGGGATACTTCATCGGCTGGCTCCTGGCTGGCTCCTCCATGGGCTGTGTCCCACTCTTCATCGTCGTCGCCCTCCTGAAGACCCAGGGTTCCTTCAAGAAGGGTTAG

Related Sequences

bmy_06801T0 Protein

Length: 1027 aa      View alignments
>bmy_06801T0
MDSRVSSTTSNGETKPMCPGLEKAEEAGALQRGQWSNKLEFVLAVAGEIIGLGNVWRFPYLCYKNGGGAFFIPYLIFLFTCGIPVFLLETALGQYTSQGGITAWRKICPIFEGIGYASQTIVILLNIYYIIVLAWALFYLFSSFTIDLPWGSCRHDWNTEHCVEFQRPSSSVNVSSENATSPVIEFWERRVLKISDGIQHLGALRWELALCLLLAWVICYFCIWKGVKSTGKVVYFTATFPYLMLVVLLIRGVTLPGAAQGIQFYLYPNLTRLWDPQVWMDAGTQIFFSFAICLGCLTALGSYNKYHNNCYRDCLALCFLNSGTSFVAGFAIFSILGFMSQEQGVPISEVAESGPGLAFIAYPRAVVMLPFSPLWACCFFFMIVLLGLDSQFVCVESLVTALVDMYPSVFRKKNRREVLILGVSVTSFLVGLVMLTEGGMYIFQLFDYYAASGMCLLFVAIFESLCVAWAYGAGRFYDNIEDMIGPSMAADDRKVAVPKDGPSVVSWVPEEGEKLDQEGKDQVKERGQWSNKLEFVLSVAGEIIGLGNVWRFPYLCYKNGGGAFFFPYFIFFFTCGIPVFFLEVALGQYTSQGSVTAWRKICPLLQGIGLASVVIEAYLNVYYIIILAWALFYLFSSFTSELPWTACTHSWNTEDCVDFLNRSAASAAAPPVNFTSPVMEFWERRVLGISSGIHELGALRWELALCLLLAWVVCYFCIWKGVKSTGKVVYFTATFPYLMLVILLIRGITLPGAYEGIIYYLKPDLLRLKDPQVWMDAGTQIFFSFAICQGCLTALGSYNKYHNNCYRDSIALCFLNSATSFVAGFVVFSILGFMSQEQGVPISEVAESAPSGPQFVCVECLVTASVDMFPRQLRKSGRRELLILAIAVMCYLIGLFLVTEGGMYIFQLFDYYACSGTCLLFLSVFEVICIGWVYGADRFYDNMEDMFGYRPWPLVKISWLFLTPGLCLATFLFSLSKYTPLRYNNVYVYPAWGYFIGWLLAGSSMGCVPLFIVVALLKTQGSFKKG*