Sequence detailsbmy_06802 (Coding sequence)

Part of scaffold_267 (SequenceType object (1))

For more information consult the page for scaffold_267 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

KDM5AENSTTRG00000008864 (Bottlenosed dolphin)

Gene Details

lysine (K)-specific demethylase 5A

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000008413, Bottlenosed dolphin)

Protein Percentage 98.81%
cDNA percentage 98.04%
Ka/Ks Ratio 0.11225 (Ka = 0.0064, Ks = 0.0567)

KDM5AENSBTAG00000020472 (Cow)

Gene Details

lysine-specific demethylase 5A

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000027280, Cow)

Protein Percentage 98.28%
cDNA percentage 92.49%
Ka/Ks Ratio 0.02554 (Ka = 0.008, Ks = 0.3151)

KDM5A (Minke Whale)

Gene Details

lysine (K)-specific demethylase 5A

External Links

Gene match (Identifier: BACU003124, Minke Whale)

Protein Percentage 99.47%
cDNA percentage 99.14%
Ka/Ks Ratio 0.1086 (Ka = 0.0025, Ks = 0.0232)

Additional orthologs identified in other species via the OPTIC pipeline.

KDM5A (Human)   Kdm5a (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 5073 bp    Location:1058983..982020   Strand:-
Raw sequence 
>bmy_06802
ATGGCGGCCGTGGGGCCGGGGGGCTACGCGGCGGAGTTCGTGCCGCCTCCGGAGTGCCCGGTTTTTGAGCCCAGCTGGGAGGAGTTCACAGACCCGCTCAGCTTCATCGGCCGCATCCGGCCCCTGGCGGAGAAAACCGGCATCTGTAAAATCCGACCGCCCAAGGATTGGCAGCCTCCATTTGCATGTGAAGTAAAAAGCTTCCGTTTTACTCCCAGAGTCCAGCGTCTGAATGAACTTGAGGCAATGACCAGAGTGAGATTGGACTTCTTGGATCAACTAGCAAAATTTTGGGAACTTCAGGGGTCTACCCTCAAGATCCCTGTGGTGGAGAGAAAAATTCTGGATCTCTATGCTTTGAGCAAGATTGTTGCCAGCAAAGGTGGTTTTGAAATGGTCACCAAAGAGAAGAAATGGTCTAAAGTGGGTAGCCGCTTGGGATATCTGCCAGGAAAAGGAACTGGGTCTCTTTTGAAGTCACATTATGAAAGAATTCTCTACCCATATGAGCTCTTCCAGTCTGGTGTCAGCCTGATGGGTGTACAAATGCCTAATTTAGATCTTAAGGAAAAAGTGGAGCCTGAGGTTCTTGGCACTGATGTCCAAACTCCCCCAGAGCCGGGCACAAGAGTGAACATTCTGCCGAAGAGAACAAGGCGTGTCAAGTCTCAGTCAGAATCTGGAGACGTGAATAGAAACACGGAACTGAAGAAACTTCGGATTTTTGGGGCTGGGCCTAAGGTTGTGGGCTTGGCAATGGGAGTAAAAGATAAAGAAGATGAGGTCTCCCGAAGACGAAAAGTTACCAACAGGTCAGACGCATTTAACATGCAAATGAGACAACGGAAAGGAACTCTCTCTGTTAACTTTGTTGATCTTTACGTTTGTATGTTTTGTGGTCGGGGAAATAATGAAGATAAATTGCTGTTGTGTGATGGATGTGATGACAGCTATCATACATTTTGTTTAATTCCCCCACTGCCTGATGTGCCCAAAGGAGACTGGAGGTGTCCTAAATGTGTCGCTGAGGAATGTAATAAACCTAGAGAAGCCTTTGGATTTGAACAAGCTGTACGAGAGTATACACTTCAGAGCTTTGGAGAGATGGCAGATAATTTTAAGTCTGACTATTTCAATATGCCAGTTCATATGGTTCCCACAGAACTAGTGGAGAAGGAATTCTGGCGGCTGGTGAGCAGCATTGAAGAAGATGTTATTGTAGAGTATGGAGCTGACATCTCCTCAAAAGACTTTGGAAGTGGATTTCCTGTAAAGGATGGTCGGAGAAAGATGCTGCCAGAAGAAGAGGAATATGCGCTTTCTGGTTGGAACCTGAATAACATGCCTGTTCTAGAGCAGTCTGTTCTTGCACATATCAATGTGGACATCTCTGGCATGAAGGTGCCATGGCTTTATGTGGGAATGTGCTTCTCTTCCTTTTGCTGGCACATCGAAGATCACTGGAGCTATTCCATCAACTACTTGCACTGGGGGGAGCCAAAGACATGGTATGGTGTGCCATCTCATGCTGCAGAACAACTGGAGGAGGTGATGAGGGAGCTGGCCCCTGAGTTATTTGAATCCCAGCCTGATCTCCTACATCAGTTAGTCACCATCATGAACCCCAATGTGCTAATGGAGCATGGTGTGCCTGTGTATAGGACCAATCAGTGTGCTGGCGAGTTTGTTGTGACGTTTCCTCGGGCCTATCACTCTGGATTTAATCAAGGCTACAACTTCGCTGAGGCTGTGAACTTCTGTACTGCTGACTGGTTGCCCATTGGCCGTCAATGTGTCAGTCATTACCGTCGGCTGAGGCGCCATTGTGTCTTCTCGCACGAGGAACTAATTTTCAAGATGGCAGCAGATCCGGAATGCTTGGACGTGGGGCTTGCCGCCATGGTGTGCAAGGAGTTGACTCTCCTGACTGAAGAGGAGACACGGTTAAGGGAGTCTGTTATGCAGATGGGTGTCCTGATGTCGGAAGAAGAAGTGTTTGAACTTGTTCCCGACGATGAGCGACAGTGTTCAGCATGCAGAACCACCTGTTTTCTCTCTGCTCTCACGTGCGCCTGTAATCCTGAGCGGCTCGTGTGTCTCTACCATCCAACTGATCTGTGCCCCTGCCCCATGCAGAAAAAATGTCTCAGATATCGCTACCCATTAGAGGACCTCCCTTCTCTGCTGTATGGTGTGAAAGTCAGGGCACAGTCCTATGACACTTGGGTCAGTCGTGTTACAGAAGCATTATCTGCCAACTTCAACCACAAGAAAGATTTGATTGAATTACGAGTAATGCTGGAAGATGCTGAGGATAGGAAATATCCAGAAAATGATCTCTTTCGAAAACTCAGGGATGCTGTAAAAGAAGCTGAGACCTGTGCTTCTGTGGCTCAGCTGCTTCTGAGCAAAAAGCAGAAGCACAGGCAGAGCCCAGATAGTGGGAGGACTCGGACCAAACTGACAGTGGAAGAGTTGAAGGCCTTTGTCCAACAGCTTTTTAGTCTTCCATGTGTCATCAGCCAAGCTCGACAAGTAAAGAATCTACTGGATGATGTGGAAGAGTTTCATGAACGTGCTCAGGAGGCCATGATGGATGAAACCCCAGATTCTTCCAAACTGCAGATGTTGATAGATATGGGCTCTGGTCTCTACGTGGAGCTACCTGAATTAGCCCGACTAAAGCAAGAGCTACAGCAGGCTCGATGGTTGGATGAAGTACGACTGACCCTGTCAGATCCACAACAGGTCACTTTGGATGTCATGAAGAAATTGATAGACTCTGGGGTGGGGTTGGCACCCCACCATGCCGTGGAGAAAGCAATGGCTGAGCTTCAGGAGCTCCTTACGGTCTCTGAGCGATGGGAAGAAAAGGCTAAGGTCTGCCTACAGGCAAGACCACGGCACAGTGTGGCAAGTTTAGAAAGCATCGTGAATGAAGCTAAGAACATTCCAGCCTTTCTACCCAATGTGTTGTCCCTGAAAGAAGCCTTACAAAAGGCTCGAGAATGGACAACTAAAGTGGAAGCTATTCAGAGTGGCAGCAGTTACGCTTACTTGGAGCAGCTGGAAAGCTTATCTGCTAAAGGCCGCCCTCTCCCTGTGCGTCTTGATGCGTTGCCCCAGGTGGAGTCACAAGTGGCGGCAGCACGGGCCTGGAGAGAACGGACTGGGAGGACCTTTCTTAAGAAGAATTCCAGCCACACGTTGCTCCAGGTGCTTAGTCCCCGAACTGACATCGGTATTTATGGGAGTGGAAAAAATAGAAGGAAAAAAGTAAAAGAACTAATAGAAAAAGAAAAAGAAAAGGATCTGGACCTTGAACCTCTGAGTGATCTGGAGGAGGGATTGGAGGAAACCAGAGATACAGCCACAGTGGTGGCAGTTTTCAAAGAACGGGAGCAAAAAGAGATTGAAGCCATGCATTCCCTCAGAGCAGCCAACCTAGCCAAGATGACAATGGTAGACCGCATAGAAGAAGTAAAATTTTGCATTTGCCGCAAGACAGCGAGTGGGTTTATGCTCCAGTGTGAGCTCTGCAAAGACTGGTTTCATAACAGCTGTGTTCCTCTTCCTAAGTCAAGTTCCCAGAAGAAAGGGTCTAGCTGGCAGGCTAAAGAAGTAAAATTCCTTTGCCCTCTCTGTATGCGGTCTCGAAGACCGAGGCTAGAGACTATTCTGTCCCTCCTGGTATCCCTTCAGAAGTTGCCTGTACGGCTGCCTGAAGGAGAGGCCCTTCAGTGTCTGACAGAACGTGCAATGAGTTGGCAGGACAGGGCCCGGCAAGCCCTGGCCACAGGTGAGCTGTCCTCTGCCCTGGCCAAGCTCTCTGTGTTGAGCCAGCGGATGGTGGAGCAGGCAGCTCGGGAGAAAACGGAAAAGATCATCAGCGCAGAGCTCCAAAAAGCCGCTGCCAATCCAGACTTACAGGGACACTTACCTAGTTTCCAGCAGTCCGCCTTTAACCGGGTGGCGAGCAGTGTATCTTCTTCCCCTCGGCAAACGGTGGACTATGATGATGAAGAGACAGACTCCGACGCAGACATTCGGGAGGCGTACGGCTACGACACGAAGGACACAGCCAGTGTGAAGTCCTCCAGCAGTCTGGAGCCCAGCCTTTTTTGTGATGAAGAGATTCCCATCAAGTCCGAGGAGGTGGTCACGCACATGTGGACGGCGCCCTCCTTCTGTGCTGAGCATGCTTACTCGTCCGCCTCTAAGAGCTGTTCTCAAGGTTCTAGCACCCCAAGGAAGCAACCTCGGAAGAGCCCTCTGGTGCCCCGTAGTTTGGAGCCTCCGGTGCTAGAGTTATCGCCTGGAGCTAAAGCCCAGCTGGAAGAACTTATGATGGTTGGAGATCTCCTGGAGGTGTCTCTGGATGAGACTCAACACATATGGCGGATTTTGCAGGCCACACACCCACCCTCTGAAGACAGGTTCCTGCATATCATGGAGGATGACAGCATGGAAGAGAAACCATTAAAAATAAAAGGAAAGGACTCTTCAGAGAAGAAACGGAAACGGAAGCTAGAAAAAGTAGAACAGCTTTTTGGCGAAGGAAAGCAGAAGTCCAAGGAGCTAAAGAAAATGGATAAACCTAAAAAGAAGAAATTAAAATTAAGTGCAGAAAAATCAAAGGAGCTGAACAAACTGGCCAAGAAACTAGCAAAAGAAGAAGARAGGAAGAAAAAGAAGGAGAAGGCTGCTGCAGCCAAAGTTGAACTTGTGAAGGAGAGCTCGGAGAAGAAGAGAGAGAAGAAGGTGCTGGACATCCCCTCCAAGTATGACTGGTCAGGAGCGGAGGAGTCCGACGACGAGAACGCTGTGTGTGCCGCGCAGAACTGCCAGAGGCCCTGCAAGGACAAGGTAGACTGGGTGCAGTGTGATGGTGGCTGTGATGAGTGGTTTCACCAAGTTTGTGTGGGTGTATCTCCAGAAATGGCTGAAAATGAAGATTACATCTGTACAAACTGTGCAAAGAAGCAGGGGCCGGATAGCCCAGGTCCAGCACCACCTCCTTCTTTCATAATGAGCTACAAACTACCAGTGGAGGATCTTAAAGAGACCAGTTAG

Related Sequences

bmy_06802T0 SequenceType object (3)

Length: 1691 aa      View alignments
>bmy_06802T0
MAAVGPGGYAAEFVPPPECPVFEPSWEEFTDPLSFIGRIRPLAEKTGICKIRPPKDWQPPFACEVKSFRFTPRVQRLNELEAMTRVRLDFLDQLAKFWELQGSTLKIPVVERKILDLYALSKIVASKGGFEMVTKEKKWSKVGSRLGYLPGKGTGSLLKSHYERILYPYELFQSGVSLMGVQMPNLDLKEKVEPEVLGTDVQTPPEPGTRVNILPKRTRRVKSQSESGDVNRNTELKKLRIFGAGPKVVGLAMGVKDKEDEVSRRRKVTNRSDAFNMQMRQRKGTLSVNFVDLYVCMFCGRGNNEDKLLLCDGCDDSYHTFCLIPPLPDVPKGDWRCPKCVAEECNKPREAFGFEQAVREYTLQSFGEMADNFKSDYFNMPVHMVPTELVEKEFWRLVSSIEEDVIVEYGADISSKDFGSGFPVKDGRRKMLPEEEEYALSGWNLNNMPVLEQSVLAHINVDISGMKVPWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGVPSHAAEQLEEVMRELAPELFESQPDLLHQLVTIMNPNVLMEHGVPVYRTNQCAGEFVVTFPRAYHSGFNQGYNFAEAVNFCTADWLPIGRQCVSHYRRLRRHCVFSHEELIFKMAADPECLDVGLAAMVCKELTLLTEEETRLRESVMQMGVLMSEEEVFELVPDDERQCSACRTTCFLSALTCACNPERLVCLYHPTDLCPCPMQKKCLRYRYPLEDLPSLLYGVKVRAQSYDTWVSRVTEALSANFNHKKDLIELRVMLEDAEDRKYPENDLFRKLRDAVKEAETCASVAQLLLSKKQKHRQSPDSGRTRTKLTVEELKAFVQQLFSLPCVISQARQVKNLLDDVEEFHERAQEAMMDETPDSSKLQMLIDMGSGLYVELPELARLKQELQQARWLDEVRLTLSDPQQVTLDVMKKLIDSGVGLAPHHAVEKAMAELQELLTVSERWEEKAKVCLQARPRHSVASLESIVNEAKNIPAFLPNVLSLKEALQKAREWTTKVEAIQSGSSYAYLEQLESLSAKGRPLPVRLDALPQVESQVAAARAWRERTGRTFLKKNSSHTLLQVLSPRTDIGIYGSGKNRRKKVKELIEKEKEKDLDLEPLSDLEEGLEETRDTATVVAVFKEREQKEIEAMHSLRAANLAKMTMVDRIEEVKFCICRKTASGFMLQCELCKDWFHNSCVPLPKSSSQKKGSSWQAKEVKFLCPLCMRSRRPRLETILSLLVSLQKLPVRLPEGEALQCLTERAMSWQDRARQALATGELSSALAKLSVLSQRMVEQAAREKTEKIISAELQKAAANPDLQGHLPSFQQSAFNRVASSVSSSPRQTVDYDDEETDSDADIREAYGYDTKDTASVKSSSSLEPSLFCDEEIPIKSEEVVTHMWTAPSFCAEHAYSSASKSCSQGSSTPRKQPRKSPLVPRSLEPPVLELSPGAKAQLEELMMVGDLLEVSLDETQHIWRILQATHPPSEDRFLHIMEDDSMEEKPLKIKGKDSSEKKRKRKLEKVEQLFGEGKQKSKELKKMDKPKKKKLKLSAEKSKELNKLAKKLAKEEERKKKKEKAAAAKVELVKESSEKKREKKVLDIPSKYDWSGAEESDDENAVCAAQNCQRPCKDKVDWVQCDGGCDEWFHQVCVGVSPEMAENEDYICTNCAKKQGPDSPGPAPPPSFIMSYKLPVEDLKETS*