Sequence details bmy_06837 (Coding sequence)

Part of scaffold_263 (Scaffold)

For more information consult the page for scaffold_263 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

RFX6 ENSTTRG00000011052 (Bottlenosed dolphin)

Gene Details

regulatory factor X, 6

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000010479, Bottlenosed dolphin)

Protein Percentage 97.3%
cDNA percentage 97.3%
Ka/Ks Ratio 0.36688 (Ka = 0.0194, Ks = 0.0528)

RFX6 ENSBTAG00000000264 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000000329, Cow)

Protein Percentage 94.93%
cDNA percentage 93.96%
Ka/Ks Ratio 0.17664 (Ka = 0.03, Ks = 0.1697)

RFX6  (Minke Whale)

Gene Details

regulatory factor X, 6

External Links

Gene match (Identifier: BACU014248, Minke Whale)

Protein Percentage 97.53%
cDNA percentage 97.98%
Ka/Ks Ratio 0.65857 (Ka = 0.0184, Ks = 0.028)

Additional orthologs identified in other species via the OPTIC pipeline.

RFX6 (Human)  

Genome Location

Sequence Coding sequence

Length: 2979 bp    Location:248851..193577   Strand:-
Raw sequence 
>bmy_06837
ATGAGAGAAAAGGAGGAAAGAGGGGAAAGGAGATGTGGGGAATGGGACTCCATTGCTCAGGCTCGACGAGCGCAGACAGGTGGAGAGAGGCAGTCCCGCCTCGGCCCACCCAGTTCCCAGGGCGGTCCGAGCTGTACCTGTGCGCGGCCTTCCTTCTCCGCGACGCCCGGGGGATCCCGAGCCGCAGCCTCCGTCCCCGCCCCAGCGGCCCCGGGTCCCCAGCCCCGCCCCGCCCCGCCCCGCCCCGGCTTCGGGGCTCCGCTGGGAGCCGGTCGAGCGGCGGGTGCCCGAGTCTCCGTGGCCAGGAGGATGGCCAAGGTCCCGGAGCTGGAAGACGCCTTCCTGCAGGTGCAGGCTTCTCCCCAGGTTTCCCCCGAAGTCCAGGAGGAGTGTTGTGTGCAGCTCCTGAGCAAGGGTTTGCTCGTTTTCCCCGAAGAAAGGGTGTACCTGGCGGCTGAAGCGCAGCCCGGGGGTGCGCTGGGCAGCGGGGAGAAAGGGGACGACCCGGAGCTGCCGGTGGGAGTTAAAGCCGAAATGCATTTAAGCAATGGTAACTTTTCCTCTGAAGAAGAGGTTGCAGACAATCAAGACAGCAAAACCAAAGCAACCGATCCACACCTCTCTCAGAAGAAAACCATCACGCAGATTATGAAGGATAAAAAGAAGCAGACTCAGCTCACCCTGCAGTGGCTTGAAGAGAATTACATTGTATGTGAAGGAGTTTGCTTACCACGGTGCATCCTTTATGCACACTATTTAGATTTCTGCCGGAAAGAGAAACTGGAGCCAGCCTGCGCGGCCACCTTTGGAAAGACAATTCGTCAAAAATTTCCCCTGTTGACGACTCGGCGGCTTGGAACAAGAGGCCATTCAAAGTTTTCTGGAAGCAAGCTGAAGAATGAGAGTGACCAGCCATCACAGTTTGCTCAGGGTGGTGGCTTCACTCGTAAATATTCGCTTAGCTCAAAAACTGGAACACTTCTTCCAGAATTCCCCAGTGCTCAACACCTTGTGTACCAAGGATGCATTTCTAAGGACAAGGTTGATACCCTAATAATGATGTACAAAACTCACTGCCAGTGCATCCTGGACAATGCAATAAATGGAAACTTTGAGGAGATCCAGCATTTCTTATTACACTTTTGGCAAGGAATGCCTGATCATCTTCTTCCCCTGCTTGAAAACCCTGTTATCATTGACATTTTCTGTGTTTGTGACTCAATTCTTTATAAGGTTCTAACAGATGTACTCATTCCTGCAACAATGCAAGAAATGCCTGAAAGCTTATTAGCAGACATAAGAAATTTTGCTAAAAATTGGGAACAATGGGTTGTTTCATCCTTGGAAAATTTGCCAGAAGCTCTAACTGACAAGAAAATACCTATTGTGCGAAGATTTGTATCATCTCTGAAACGACAAACATCTTTCTTACATCTTGCACAGATTGCCAGACCAGCTCTCTTTGACCAGCATGTCGTGAATTCTATGGTATCTGACATTGAAAAGGTTGACTTGAATAATGACTCTATCACAGTGTTCCAAGAACTGAAAGATCTCCTTAAGAAGAATGCCACTGTGGAGGCTTTTATTGAATGGTTGGATACTGTGGTAGAGCAGAGAGTTATTAAGACCAGCAAACAAAATGGAAGATCATTAAAGAAGAGGGCTCAAGACTTTCTGCTAAAGTGGAGCTTTTTTGGTGCTCGAGTAATGCATAATCTCACCTTGAACAATGCGTCTAGCTTTGGTTCTTTCCATTTGATCCGAATGCTTCTTGATGAATACATTCTGCTGGCCATGGAGACCCAGTTTAATAATGACAAAGAGCAGGAGTTACAGAATTTACTGGACAAGTACATGAAGAACTCAGATGCAAGTAAAGCTGCCTTCACTGCTTCTCCGAGTTCATGCTTTCTGGCCAACCGTAATAAAGGGAGCACTGTTCCCAGCGATACCGTGAAGAATGAAAGCCATGTGGAAACAGCCTATCTTCCTCTATCATCCAGTCAACCTGGAGGCTTAACCTCTGCTCTGCACCCATTCCCAGCTGGGAATACAGACAACATGCCGCTCACTGGTCAAATGGAGCTTTCCCAGAGCTCTGGTCATCTGATGACACCACCCATTTCTCCAGCCATGGCGAGCCGAGGAAGCGTCATTAATCAGGGGCCGATGGCAGGGAGACCCCCGAGTGTGGGCCCAGTACTGTCAGCCCCATCACACTGCTCAGCATACTCAGAGCCTGTTTATCCTACTCTCCCTCAAGCCAACCATGACTTTTACGGGACCAACTCTAACTATCAGACTGTGTTTAGGGCACAGCCTCACACCCCATCAGGACTCTATCCTCATCGCCCGGAGCACAGTCGATGCATGGTCTGGAGTGAACAGCAGCTTTCTAGAGACTTCTTCAGTGGCAGCTGTGCTGGGTCCCCATATAATTCTCGGCCATCTTCCAGCTATGGACCATCCCCACATGGCCAAGATTCACACAGTATGCAGTTTTTAAATACAGGAAGCTTCAATTTCCTGAGCAACGCAGGAGCTGCCAGCTGCCAAGGAGCAACATTGCCTCCTAATTCACCTAATGGGTACTATGGAAGCAACGTAAACTACCCAGAGTCTCACAGACTTGGATCGATGGTGAATCAACATGTTTCTGTCATCAGCAGTGTTCGCTCCCTGCCTCCCTATGGTGACATCCATGATCCGCTCAACATTTTAGATGATGGTAGTAGAAAGCAGACCAGCTCGTTTTATGCAGACACACCACCTGCAGTTGCATGTCGAACTCCTGTAGTAGCATCCAGCTTGCAAACCCCAATTCCTTCCTCCTCATCCCAGTGTATGTATGGAACTTCCAATCAATATCCAGCTCAAGAAACCCTGGACTCCCATGGAGCAAATGGTAGAGAAATGGCATCCTCTCTACCACCAATCAACACTGTGTTCATGGGAACAGCAGCTGGAGGCACTTAG

Related Sequences

bmy_06837T0 Protein

Length: 993 aa      View alignments
>bmy_06837T0
MREKEERGERRCGEWDSIAQARRAQTGGERQSRLGPPSSQGGPSCTCARPSFSATPGGSRAAASVPAPAAPGPQPRPAPPRPGFGAPLGAGRAAGARVSVARRMAKVPELEDAFLQVQASPQVSPEVQEECCVQLLSKGLLVFPEERVYLAAEAQPGGALGSGEKGDDPELPVGVKAEMHLSNGNFSSEEEVADNQDSKTKATDPHLSQKKTITQIMKDKKKQTQLTLQWLEENYIVCEGVCLPRCILYAHYLDFCRKEKLEPACAATFGKTIRQKFPLLTTRRLGTRGHSKFSGSKLKNESDQPSQFAQGGGFTRKYSLSSKTGTLLPEFPSAQHLVYQGCISKDKVDTLIMMYKTHCQCILDNAINGNFEEIQHFLLHFWQGMPDHLLPLLENPVIIDIFCVCDSILYKVLTDVLIPATMQEMPESLLADIRNFAKNWEQWVVSSLENLPEALTDKKIPIVRRFVSSLKRQTSFLHLAQIARPALFDQHVVNSMVSDIEKVDLNNDSITVFQELKDLLKKNATVEAFIEWLDTVVEQRVIKTSKQNGRSLKKRAQDFLLKWSFFGARVMHNLTLNNASSFGSFHLIRMLLDEYILLAMETQFNNDKEQELQNLLDKYMKNSDASKAAFTASPSSCFLANRNKGSTVPSDTVKNESHVETAYLPLSSSQPGGLTSALHPFPAGNTDNMPLTGQMELSQSSGHLMTPPISPAMASRGSVINQGPMAGRPPSVGPVLSAPSHCSAYSEPVYPTLPQANHDFYGTNSNYQTVFRAQPHTPSGLYPHRPEHSRCMVWSEQQLSRDFFSGSCAGSPYNSRPSSSYGPSPHGQDSHSMQFLNTGSFNFLSNAGAASCQGATLPPNSPNGYYGSNVNYPESHRLGSMVNQHVSVISSVRSLPPYGDIHDPLNILDDGSRKQTSSFYADTPPAVACRTPVVASSLQTPIPSSSSQCMYGTSNQYPAQETLDSHGANGREMASSLPPINTVFMGTAAGGT*