Part of scaffold_263 (Scaffold)

For more information consult the page for scaffold_263 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

RSPH4A ENSTTRG00000010968 (Bottlenosed dolphin)

Gene Details

radial spoke head 4 homolog A (Chlamydomonas)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000010396, Bottlenosed dolphin)

Protein Percentage 94.24%
cDNA percentage 95.27%
Ka/Ks Ratio 0.34997 (Ka = 0.0132, Ks = 0.0376)

RSPH4A ENSBTAG00000011890 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000015775, Cow)

Protein Percentage 88.97%
cDNA percentage 92.94%
Ka/Ks Ratio 0.40859 (Ka = 0.0557, Ks = 0.1364)

RSPH4A  (Minke Whale)

Gene Details

radial spoke head 4 homolog A (Chlamydomonas)

External Links

Gene match (Identifier: BACU014244, Minke Whale)

Protein Percentage 98.09%
cDNA percentage 98.87%
Ka/Ks Ratio 0.46503 (Ka = 0.0088, Ks = 0.019)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2043 bp    Location:422322..406826   Strand:-
>bmy_06842
ATGGAAGACTCGACCCCCCTGAAACAAAAAATAGAACACCAAGAACTTGGGGAAACAGGGCGTCCGTGGGAAGAAATGGTAACAACCTCCCAAGATTCCGAACCTGGGTTATCCGAGGCCTCAGAGTCGGAGCAGGGGCCGGAAACTGGACCCCAGCCCAGGAGCAGCCCTCCTGGGATCCCCCAATCTGGAGCCAGCACGCCTGTGGATGACCTCGTAGGACCAGGTGTGTCATCTCCACCTTCCCCATCTCAGGAGCCCTCTTCCACTCCTTCTCCCCTGGCTCTGGCCGTGCAGGACCTTATGGCACCATGGCAGTCAGACAAGACCACTAGTGTGATTTCTGAAGCTGGGACACCTCACTTTGACCATTTGGAACAGTCATCTGATAAAGGAGAATCAACTCCTCATCAAACATGCCAATCAGAGGGAAACACTTTTCATCAATCTCAGCAAACCAAATGTCACCTGTATGGACCGAGGGATGTGAGCTACAACAACTCTAAACGGAAAGAGCTGAGATTTGACATTTTTCAAGAAGAAGACTCAAACAGTAACTATGATCTGGCTCAGCCTGAGTCTGGGGCTTCTGAAGTGGCCCCCAGCATGCTTGAGATTGCCATTCAGAATGCTAAGGCTTACCTACTAAAGTCCAGTAGCAAGTCAGGCTTAAATCTATATGATCATCTTTCTGAAATGCTGACCAAGGTCTTAGATAAGCGTCCTGAGAATGCTGTGGACATCATTGAAAATGTTAGCCAAGATGTGAAGATGGAACATTTTAGTAAAAAACTGGATACACTCCAAAATGAGAATGAGATGCTTCCAACCTATGAAATAGCAGAGAAGCAAAAAGCTCTTTTTCTCCAGGAAAATTTAGAAGGAGCTGACCAAGAAATGGAAGATGAAATACAACTTACTGACACCCACCCAATCCAAAAATGTCGTTTCTGGGGTAAGATCTTAGGTCTGGAAATGAATTATATTGTAGCTGAAGTGGAATTCCGTGAGGGAGAAGATGAAGAGGAGGTAGAAGAGGAAGATGTACCTGAAGAGAGGGACAATGGAGACAGTGAAGCTGATGAAGATGAATTACCAAGGTCCTTTTACAAGGCCCCACAGGCTATTCCAAAGGAAGAAAGCAGAACAGGTGCCAACAAATATGTATATTTTGTTTGCAATGAACCAGGAAGACCATGGGTGAAGTTACCAGCAGTTACACCTGCACAAATTGTTATTGCAAGAAAAATCAAGAAATTTTTCACTGGGCGATTGGATACCCCCATCATAAGCTACCCACCCTTCCCAGGAAATGAGAGTAATTACTTACGAGCACAAATCGCCAGAATTTCAGCAGGGACTCATGTCAGCCCTCTAGGATTCTATCATTTTGGTGAAGAAGAAGAAGAGGAGGAAGAAACAGAAGGCAGGCGAGATAGCTTTGAAGAAAACCCTGATTTTGAAGGCATCCAAGTGATTGATCTAGTGGAATCCCTATCCAATTGGGTTCATCATGTACAACATATACTCCCTCAGGGTCGCTGTAATTGGTTCAACCCCATACAAAAAAGTGAGGAGGAAGAAGAAGCAGAAGAAGAAGAAGAAGAAGAAGAAGAAAGAGAAGAGCCTGACTACATAGAACAGGAAGTAGGGCCTCCTCTCTTGACACCAATCTCTGAAGATTTAGAGATCCAGAATATACCGCCTTGGACAGCACGGTTATCCTCAAATCTCATTCCTCAATATGCTATTGCAGTCCTTAGATCCAACCTTTGGACTGGAGCATATGCCTTTTCCAATGGCAAAAAGTTTGAAAATTTCTACATAGGCTGGGGTCATAAATATAGTCCAGACAGCTATACACCTCCAGTTCCACCACCAGTTTATCAAGAGTACCCCAGTGGACCAGAAATTACAGAAATGGATGACCCTAGTGTGGAAGAGGAGCAGGCTTTCAGGGCTGCACAAGAAGCAGCTGTAAATTCAACAGAGGAAAATGAAGAAACTGAGGAAGATGAAGATGAGGAAGATGACTATGACTAA

Related Sequences

bmy_06842T0 Protein

Length: 681 aa      View alignments
>bmy_06842T0
MEDSTPLKQKIEHQELGETGRPWEEMVTTSQDSEPGLSEASESEQGPETGPQPRSSPPGIPQSGASTPVDDLVGPGVSSPPSPSQEPSSTPSPLALAVQDLMAPWQSDKTTSVISEAGTPHFDHLEQSSDKGESTPHQTCQSEGNTFHQSQQTKCHLYGPRDVSYNNSKRKELRFDIFQEEDSNSNYDLAQPESGASEVAPSMLEIAIQNAKAYLLKSSSKSGLNLYDHLSEMLTKVLDKRPENAVDIIENVSQDVKMEHFSKKLDTLQNENEMLPTYEIAEKQKALFLQENLEGADQEMEDEIQLTDTHPIQKCRFWGKILGLEMNYIVAEVEFREGEDEEEVEEEDVPEERDNGDSEADEDELPRSFYKAPQAIPKEESRTGANKYVYFVCNEPGRPWVKLPAVTPAQIVIARKIKKFFTGRLDTPIISYPPFPGNESNYLRAQIARISAGTHVSPLGFYHFGEEEEEEEETEGRRDSFEENPDFEGIQVIDLVESLSNWVHHVQHILPQGRCNWFNPIQKSEEEEEAEEEEEEEEEREEPDYIEQEVGPPLLTPISEDLEIQNIPPWTARLSSNLIPQYAIAVLRSNLWTGAYAFSNGKKFENFYIGWGHKYSPDSYTPPVPPPVYQEYPSGPEITEMDDPSVEEEQAFRAAQEAAVNSTEENEETEEDEDEEDDYD*