Sequence detailsbmy_06852 (Coding sequence)

Part of scaffold_263 (SequenceType object (1))

For more information consult the page for scaffold_263 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

DSEENSTTRG00000016545 (Bottlenosed dolphin)

Gene Details

dermatan sulfate epimerase

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000015686, Bottlenosed dolphin)

Protein Percentage 98.4%
cDNA percentage 98.25%
Ka/Ks Ratio 0.16751 (Ka = 0.0072, Ks = 0.0432)

BT.48522ENSBTAG00000005205 (Cow)

Gene Details

Dermatan-sulfate epimerase

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000006855, Cow)

Protein Percentage 95.94%
cDNA percentage 94.08%
Ka/Ks Ratio 0.1019 (Ka = 0.0193, Ks = 0.1891)

DSE (Minke Whale)

Gene Details

dermatan sulfate epimerase

External Links

Gene match (Identifier: BACU014237, Minke Whale)

Protein Percentage 99.57%
cDNA percentage 99.43%
Ka/Ks Ratio 0.12399 (Ka = 0.0016, Ks = 0.0131)

Additional orthologs identified in other species via the OPTIC pipeline.

DSE (Human)   Dse (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 2973 bp    Location:694627..614339   Strand:-
Raw sequence 
>bmy_06852
ATGCAGCTCCTGTTCCTCCTCACTGATGCCATCCAGCAGAAGAGGCAGATTACCGCTGAATTTCCTTCTATTTGTTTCGACTCCCTTGGGGTGTTCCATAAACATGATCTTGGATCTTTCGAAGATGGTTTGGCTGCCTTGGAGATTTGGAGATCTGATGCCACGATGAGGACTCACACACGGGGGGCTCCCAGTGTGTTTTTCATATATTTATTTTGCTTTGTGTCAGCCTACGTCACCGACGAGAACCCAGAAGTCATGATTCCCTTTATGAATGCCAACTACGACAGCCATCCAATGCTGTACTTCTCCAGGGCAGAGGTGGCCAAGCTCCAGCTCAGGGCTGCCAGCTCCCACGAGCACATTGCYGCCCGGCTCACTGAGGCCGTGCACACCATGCTGTCCAGCCCCTTGGAGTACCTCCCTCCCTGGGATCCCAAGGAGTACAGCGCCCGCTGGAATGAAATTTACGGCAACAACTTGGGGGCCTTGGCCATGTTCTGCRTGCTGTTGGTGAAAGATGCTCCTTGGGATGAAGTCCCGCTTGCTCACTCCCTGGTTGGTTTTGCCACTGCCTATGACTTCTTGTACAACTACCTGAGCAAGACACAACAGGAGAGGTTTCTTGAAGTGATTGCCAATGCCTCGGGATATATGTATGAAACTTCATACAGGAGAGGATGGGGATTTCAATACCTGCACAATCATCAGCCCACCAACTGCATGGCCTTGCTCACAGGAAGCCTAGTCCTGATGAATCAAGGGTATCTTCAAGAAGCTTACTTATGGACCAAACAAGTCCTGACCATCATGGAGAAGTCTCTTGTCTTGCTCCGAGAGGTGACAGACGGCTCCCTCTATGAAGGAGTTGCATATGGCAGCTACACCACTAGATCACTCTTCCAGTATATGTTTCTTGTTCAGAGGCACTTTGACATCAACCACTTTGGCCACCCATGGCTTAAACAACACTTTGCATTTATGTATAGAACCATCCTGCCAGGGTTTCAAAGAACTGTGGCTATTGCAGACTCAAATTACAACTGGTTTTATGGTCCAGAAAGCCAATTAGTGTTCCTGGATAAATTTGTCATGCGTAACGGCAGTGGTAACTGGTTGGCTGACCAGATCAGAAGGAACCGTGTGATGGAAGGTCCAGGGACGCCTTCCAAAGGGCAGCGCTGGTGTACACTTCACACAGAATTTCTCTGGTATGATGCCAGCTTGAAATCTGTCCCCCCTCCAGATTTTGGCACCCCAGCATTGCATTATTTTGAAGACTGGGGTGTTGTGACTTATGGAAGTGCGCTGCCTGCAGAAATCAATAGATCTTTCCTTTCCTTCAAGTCAGGAAAACTTGGGGGACGTGCAATATATGACATTGTCCACAGAAACAAATACAAAGACTGGATCAAAGGCTGGAGAAATTTTAACGCAGGCCATGAACATCCTGATCAAAACTCCTTTACTTTTGCTCCCAACGGTGTGCCTTTCATTACTGAGGCTCTCTATGGGCCAAAGTATACCTTCTTCAACAATGTTTTGATGTTTTCCCCAGCTGTGTCCAAGAGCTGCTTTTCTCCCTGGGAAGGTCAGGTCACAGAAGACTGTTCATCAAAATGGTCTAAATACAAGCATGACCTGGCAGCTAGCTGTCAGGGGAGAGTGGTTGCTGCCGTGGAGAAAAATGGGGTGGTTTTCATCCGAGGAGAGGGTGTGGGCGCTTATAACCCCCAGCTCCGTCTGAAGAACGTTCAGAGGAATCTGATGCTCCTGCATCCACAGCTTCTCCTCCTTGTGGATCAGATACACCTGGGAGAGGACAGCCCCTTGGAGACGGCAGCAAGCTTCTTCCACAATGTGGATTTTTCTTTTGAGGAGACAGTGGTAGATGGGGTCCATGGGGCTTTCATCAGGCAGCGAGATGGTCTCTATAAAATGTACTGGATGGATGATACTGGCTACAGTGAGAAAGGAACCTTTGCTTCAGTGACATACCCTCGGGGCTATCCCTACAACGGGACCAACTATGTGAATGTCACCACACACCTCCGAAGTCCCATCACCAGGGCAGCTTACCTCTTCATAGGGCCCTCCGTAGATGTCCAGAGCTTCAGCATCCACGGAGACTCTCAGCAACTGGATGTGTTCATAGCCACCAGCGAGCATGCCTACGCCACTTACCTGTGGACAGGTGAGACTACAGAACAGTTGGCCTTGGCACAGGTCATTGCCGACCGTCAGAAAATTCTGTTTGACCGGAGTTCAGCCATCAAGAGCACCGTGGTCCCTGAGGTGAAGGACTACGCCGCTATTGTGGAACAGAGCCTGCAGCATTTTAAGCCAGTGTTCCAGCTGCTGGAGAAGCAGATCCTGTCCCGAGTCCGGAACACAGCCAGCTTTAGGAAGACTGCTGAGCGCCTGCTGAGATTTTCAGATAAGAGACAGACCGAGGAGGCCATCGACAGGATTTTTGCCATATCACAGCAGCAGCAGCAGCAGCAAAGCAAGTCCAAGAAAAACCGAAGGGGAGGCAAGCGCTATAAATTTGTGGATGCCGTCCCTGATATTTTTGCACAGATTGAAGTCAATGAGAAAAAGATTCGACAGAAAGCTCAGATTTTGGCACAGAAAGAACTGCCCATAGATGAAGATGAAGAAATGAAAGACCTTTTAGATTTTGCAGATGTAACATATGAGAAACACAAAAATGGTGATTTGATGAAAGGCCGGTTTGGACAGACTCGGATGGTGACGACGACTCGCAGCAGAGCCCCAGCACTGTCTGCTTCGTATACCAGGCTGTTCCTGATTCTGAACATCGCTATTTTCTTTGTCATGTTGGCAATGCAACTGACTTATTTCCAGAGGGCCCAGAGCCTACATGGCCAAAGATGTCTTTATGCAGTCCTTCTAATAGATAGCTGTATTTTATTATGGTTGTACTCTTCTTGTTCCCAATCCCAGTGTTAG

Related Sequences

bmy_06852T0 SequenceType object (3)

Length: 991 aa      View alignments
>bmy_06852T0
MQLLFLLTDAIQQKRQITAEFPSICFDSLGVFHKHDLGSFEDGLAALEIWRSDATMRTHTRGAPSVFFIYLFCFVSAYVTDENPEVMIPFMNANYDSHPMLYFSRAEVAKLQLRAASSHEHIAARLTEAVHTMLSSPLEYLPPWDPKEYSARWNEIYGNNLGALAMFCXLLVKDAPWDEVPLAHSLVGFATAYDFLYNYLSKTQQERFLEVIANASGYMYETSYRRGWGFQYLHNHQPTNCMALLTGSLVLMNQGYLQEAYLWTKQVLTIMEKSLVLLREVTDGSLYEGVAYGSYTTRSLFQYMFLVQRHFDINHFGHPWLKQHFAFMYRTILPGFQRTVAIADSNYNWFYGPESQLVFLDKFVMRNGSGNWLADQIRRNRVMEGPGTPSKGQRWCTLHTEFLWYDASLKSVPPPDFGTPALHYFEDWGVVTYGSALPAEINRSFLSFKSGKLGGRAIYDIVHRNKYKDWIKGWRNFNAGHEHPDQNSFTFAPNGVPFITEALYGPKYTFFNNVLMFSPAVSKSCFSPWEGQVTEDCSSKWSKYKHDLAASCQGRVVAAVEKNGVVFIRGEGVGAYNPQLRLKNVQRNLMLLHPQLLLLVDQIHLGEDSPLETAASFFHNVDFSFEETVVDGVHGAFIRQRDGLYKMYWMDDTGYSEKGTFASVTYPRGYPYNGTNYVNVTTHLRSPITRAAYLFIGPSVDVQSFSIHGDSQQLDVFIATSEHAYATYLWTGETTEQLALAQVIADRQKILFDRSSAIKSTVVPEVKDYAAIVEQSLQHFKPVFQLLEKQILSRVRNTASFRKTAERLLRFSDKRQTEEAIDRIFAISQQQQQQQSKSKKNRRGGKRYKFVDAVPDIFAQIEVNEKKIRQKAQILAQKELPIDEDEEMKDLLDFADVTYEKHKNGDLMKGRFGQTRMVTTTRSRAPALSASYTRLFLILNIAIFFVMLAMQLTYFQRAQSLHGQRCLYAVLLIDSCILLWLYSSCSQSQC*