Sequence detailsbmy_06879 (Coding sequence)

Part of scaffold_259 (SequenceType object (1))

For more information consult the page for scaffold_259 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SEMA4CENSTTRG00000007886 (Bottlenosed dolphin)

Gene Details

sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4C

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000007460, Bottlenosed dolphin)

Protein Percentage 94.12%
cDNA percentage 93.88%
Ka/Ks Ratio 0.07239 (Ka = 0.0052, Ks = 0.0712)

Additional orthologs identified in other species via the OPTIC pipeline.

SEMA4C (Cow)   SEMA4C (Human)   Sema4c (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 2502 bp    Location:751222..758972   Strand:+
Raw sequence 
>bmy_06879
ATGGCCCCGCACTGGGCCGTCTGGCTGCTGGCAGTGGGACTGTGGGGCCTGGGCATTGGGGCTGAGGTGTGGTGGAACCTGGTGCCCCGGAAGACGGTATCTTCTGGGGAGCTGGCCACAGTGGTGCGGCGCTTCTCCCAGACGGGCATCCAGGACTTTCTGACGCTGACCTTGACCGAGCAGACCGGGCTCCTGTACGTAGGGGCCCGGGAGGCCCTGTTTGCCTTCAGCGTGGAGGCTCTGGAGCTGCAGGGAGTGATCTCATGGGAGGCGCCAGCTGAGAAGAAGGCCGAGTGTACCCAGAAAGGGAAGAGTAACCAGACGGAGTGTTTCAACTTCATCCGCTTCCTGCAGCCGTATAACGCATCCCACCTGTACGTCTGCGGTACCTACGCCTTCCAGCCCAAGTGCACCTACATTGACATGCTCACCTTCACCCTGGAGCGTGGCGAGTTCGAAGATGGCAAGGGGAAGTGTCCCTATGACCCAGTTAAGGGCCACACCGGCCTCCTTGTGGACGGGGAGCTGTACTCGGCCACGCTCAACAACTTCCTGGGCACGGAGCCTGTCATCCTGCGGAACATGGGGCCGCACCACGCCATGAAGACGGAGTACCTGGCCTTCTGGCTCAACGAACCGCATTTCGTGGGCTCCGCCTACATCCCGGAGAGCGTGGGCAGCTTCACGGGGGACGACGACAAGGTGTACTTCTTCTTCAGCGAGCGCGCCGTGGAATACGATTGCTACGCCGAGCAGGTGGTGGCCCGCGTGGCCCGAGTCTGCAAGGGCGACGTGGGGGGCGCGCGGACGCTGCAGAGGAAGTGGACCACGTTCCTGAAGGCGCGGCTGGTGTGCTCCGCGCCCGACTGGCAGCTCTACTTCAACCAGCTGCAGGCGCTGCATACCCTGCAGGACGCCTCCTGGCACAACACCACCTTCTTCGGGGTTTTTCGGGCGCGGTGGGGCGACATGGACCTGTCAGCAGTCTGCGAGTACCAGTTGGAAGAGATCCAGAGGGTGTTCGAGGGGCCCTACAAGGAGTACCATGAGCAAGCCCAAAAGTGGGGCCGCTACACCGACCCGGTACCCAGCCCGCGGCCCGGCTCGTGCATCAACAACTGGCACCGACGCCACGGCTATACCAGTTCCCTGGAGCTGCCAGACAACACCCTCAACTTCATCAAGAAGCACCCGCTGATGGAGGAGCAGGTGGGGCCTCGGTGGGGCCGGCCCCTGCTGGTGAAGAAAGACGCCAACTTCACCCACCTGGTGGCCGACCGGGTCACGGGGCTTGATGGAGCCACCTATACAGTGCTGTTCATCGGCACAGGAGATGGCTGGCTGCTCAAGGCCGTGAGCCTGGGGCCCTGGGTCCACCTGATTGAGGAGCTGCAGGTGTTTGACCAGGAGCCGGTGGAAAGCCTCGTCCTGTCCCGGAGCAAGAAGCTGCTCTTTGCGGGCTCCCGCTCCCAGCTGGTCCAGCTGCCCCTGGCCGACTGTGTGAAGTACCGCTCCTGCGCTGACTGCGTGCTTGCTCGGGACCCCTACTGCGCCTGGAGCGTCAACACCAGCCGCTGCATGGCCGTGGGCGGCCACTCCGGATCCCTGCTGATCCAGCACGTGACAGTCTCAGACACCTCAAGCATTTGTAACTTCCGGGGCAGTAAGAAAGTCAGGCTCACGCCCAAAAACATCACGGTGGTGGCAGGCACAGACCTGGTGCTGCCCTGCCGCCTCTCCTCCAACCTCGCCCATGCCCGCTGGACCTTCGGGGGCCGGGAGCTGCCTGCAGAGCAGCCCGGCTCCTTCCTCTACGACGCCCGGCTGCAGGCCCTGGTGGTGATGGCCGCCCAGCCCCGCCACGCCGGGGCCTACCACTGCTTCTCGGAGGAGCAGGGGGCCCGGCTGGCTGCCGAAGGCTACCTGGTGGCAGTGGTGGCGGGCCCGTCGGTGACCCTGGAGGCCCGGGCCCCCCTGGAGAGCCTGGGGCTGGTGTGGCTGGCCGTGGTGGCCCTGGGGGCCGTGTGCCTGGTGCTGCTGCTGCTGGTTCTGTCCCTGCGCCGGCGGCTGCGGGAGGAGCTGGAGAAGGGCGCCAAGGCAGCCGAGAGGACCCTGGTGTACCCTCTGGAGCTGCCCAAGGAGCCCACCAGTCCCCCCTTCCGGCCCGGCCCCGAGACGGACGAGAAACTCTGGGACCCCGTGGGCTACTACTACTCGGACGGCTCCCTCAAGATCGTTCCTGGACACGCCCGGTGCCAGCCCGGCGGCGGGCCCCCCTCGCCGCCTCCTGGCATCCCCGGCCAGCCCCTGCCTTCTCCAACTCGGCTCCACCTGGGGGGTGGGCGGAACTCCAATGCCAATGGATACGTGCGCTTACAGCTGGGAGGGGAGGACCGGGGCAGCCTCGGGCACCCGCTGCCCGAGCTCGCCGACGAGCTGAGACGCAAACTGCAGCAGCGCCAGCAGCTGCCGGACTCCAACCCCGAGGAGTCCTCGGTGTGA

Related Sequences

bmy_06879T0 SequenceType object (3)

Length: 834 aa      
>bmy_06879T0
MAPHWAVWLLAVGLWGLGIGAEVWWNLVPRKTVSSGELATVVRRFSQTGIQDFLTLTLTEQTGLLYVGAREALFAFSVEALELQGVISWEAPAEKKAECTQKGKSNQTECFNFIRFLQPYNASHLYVCGTYAFQPKCTYIDMLTFTLERGEFEDGKGKCPYDPVKGHTGLLVDGELYSATLNNFLGTEPVILRNMGPHHAMKTEYLAFWLNEPHFVGSAYIPESVGSFTGDDDKVYFFFSERAVEYDCYAEQVVARVARVCKGDVGGARTLQRKWTTFLKARLVCSAPDWQLYFNQLQALHTLQDASWHNTTFFGVFRARWGDMDLSAVCEYQLEEIQRVFEGPYKEYHEQAQKWGRYTDPVPSPRPGSCINNWHRRHGYTSSLELPDNTLNFIKKHPLMEEQVGPRWGRPLLVKKDANFTHLVADRVTGLDGATYTVLFIGTGDGWLLKAVSLGPWVHLIEELQVFDQEPVESLVLSRSKKLLFAGSRSQLVQLPLADCVKYRSCADCVLARDPYCAWSVNTSRCMAVGGHSGSLLIQHVTVSDTSSICNFRGSKKVRLTPKNITVVAGTDLVLPCRLSSNLAHARWTFGGRELPAEQPGSFLYDARLQALVVMAAQPRHAGAYHCFSEEQGARLAAEGYLVAVVAGPSVTLEARAPLESLGLVWLAVVALGAVCLVLLLLVLSLRRRLREELEKGAKAAERTLVYPLELPKEPTSPPFRPGPETDEKLWDPVGYYYSDGSLKIVPGHARCQPGGGPPSPPPGIPGQPLPSPTRLHLGGGRNSNANGYVRLQLGGEDRGSLGHPLPELADELRRKLQQRQQLPDSNPEESSV*