Sequence detailsbmy_06893 (Coding sequence)

Part of scaffold_259 (SequenceType object (1))

For more information consult the page for scaffold_259 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

BT.45843ENSBTAG00000014090 (Cow)

Gene Details

AT-rich interactive domain-containing protein 5A

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000026200, Cow)

Protein Percentage 88.27%
cDNA percentage 90.93%
Ka/Ks Ratio 0.22198 (Ka = 0.0584, Ks = 0.2629)

Additional orthologs identified in other species via the OPTIC pipeline.

ARID5A (Human)   Arid5a (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1782 bp    Location:1025276..1013088   Strand:-
Raw sequence 
>bmy_06893
ATGGCACCTCCTGTCAAAGGCAAAAGGAAACAGTCAGAGGACGGTGACCCCCTAGACCCACCTGTGTCTCCTCAACCCAGTGCTGAGCAGAACAGGAGCCAGAGCCCCGTCCAGCTGGAGGACTCCCCCGAGGCAGGCGGGGAGCGGGAGGAGGAGCAGGCCTTCCTGGTCAGCCTCTACAAGTTCATGAAGGAGCGACACACGCCCATCGAGAGGGTGCCCCATCTCGGCTTCAAGCAGATTAACCTGTGGAAGATCTACAAGGCCGTGGAGAAGCTGGGGGCCTATGAGCTGGTGACTGGCCGCCGCCTCTGGAAGAACGTGTATGACGAGCTGGGGGGCAGCCCGGGCAGCACCAGCGCAGCCACGTGCACGCGCCGCCACTACGAGAGGTTGGTCCTCCCATACGTGCGGCACCTGAAGGGAGAGGATGACAAGCCCCTGCCCCCCTCCAAGCCCAGGAAGCAGTACAAGATGGCCAAGGAGCCTCGGGGGGATGACGGGGCCACTGAGAGGCCAAAGAAAGCCAAGGAGGAGAAGCGGGTGGACCAGATGATGCCAGGAAAGACCAAAACAGATGCCCCTGACCTGGCAAGGCTTCCTAGCCAGGAGCCCTCCAGGGACGGCATGGAACAGCGAGGCCCAGCCCCTGGGCCCTCTCTGCCCTTTGTGGGTGCCAGCGGCTGCCCTGAGGCCTACAGGCGGCTTCTGTCCAGCTTCTACTGCAAAGGGACACATGGTATCATGTCACCACTGGCCAAAAAGAAGCTTCTGGCCCAGGTGAGCAAGGCGGAGGCCTTGCAGTGCCAGGAGGAGGGCTGTCGCCACGGGGCAGGTGGGGAGTCCCAGGCACCCCCAGCTATTCGGCCCCTGGAGAATCCCCGGAGCCCAGGAGGGCCGGCCGAGAACTCCAGGCACCGGCTGACGCCTCTGGAGGGAACACAGGGCCCTGGTGGCAGCCTCAAGGAGGAGGCTCAGGTGGGCCCTCGCCCGTCGGCCCCCATCTTCACTGGCTGCTTCCACGCCTACCCCACCGAGGTGCTGAAGCCTATCAGCCAGCACCCCCGGGACTTCTTCCCCAGTCTTAAAGATGGGGTGTTATTAGGGCCTCCTAGCAAAGAGGAGGGGCTGCCAGCCAAAGAGCCCCAGCTGGTGTGGGGCGGGGATGCCGACCACCCCTCTGCATTCCACAAGGGCGGCTCCAGAAGGGGCGGCCTCTACCCCAAACCCAAAGCCTGCTGGGTGTCCCCCATGACCAAGGTCCCTGCCGAGAGCCCTGTGCCCCTGACCACCTTTCCAAGCAGCCCAGGCCTGGGCAACAAGCGCAGCCTGGAGGAAGAGGGCTTGGTCCATGGCGGCAAAAAACTGCGGGCAGTGTCTCCCTTTCTTAAGGAGGTGGATGCCAAGGAGTGCGGGACCAAGTCTGTGGGGCCCGACTTGGCCGTCTCCTGCCTGCTGGGCCCGGCCCTGGGGCCCACCCTTCCAGAGGCCTACAGGGGCACCATGCTGCGCTGCCCACTGAACTTCGCTGGCACCCTGGACCCCTTAAAGGGCCAGGCCACACTCCCTTTCAGCCCCCTGGTCATCCCGGCCTTCCCAGCCCACCTCCTGGCCACTGCAGCACCCTCACCCATGGCCGCTGGCCTGATGCACTTCCCCCCTGCATCCTTCGACAGTGCCCTGCGCCACAGACTTTGCCCAGCCTCGTCTGCGTGGCACGTGCCACCTGCCACAACCTATGCAGTGCCCCACTTCTCCTTCCACCTCAACACCAAGCTGTAG

Related Sequences

bmy_06893T0 SequenceType object (3)

Length: 594 aa      
>bmy_06893T0
MAPPVKGKRKQSEDGDPLDPPVSPQPSAEQNRSQSPVQLEDSPEAGGEREEEQAFLVSLYKFMKERHTPIERVPHLGFKQINLWKIYKAVEKLGAYELVTGRRLWKNVYDELGGSPGSTSAATCTRRHYERLVLPYVRHLKGEDDKPLPPSKPRKQYKMAKEPRGDDGATERPKKAKEEKRVDQMMPGKTKTDAPDLARLPSQEPSRDGMEQRGPAPGPSLPFVGASGCPEAYRRLLSSFYCKGTHGIMSPLAKKKLLAQVSKAEALQCQEEGCRHGAGGESQAPPAIRPLENPRSPGGPAENSRHRLTPLEGTQGPGGSLKEEAQVGPRPSAPIFTGCFHAYPTEVLKPISQHPRDFFPSLKDGVLLGPPSKEEGLPAKEPQLVWGGDADHPSAFHKGGSRRGGLYPKPKACWVSPMTKVPAESPVPLTTFPSSPGLGNKRSLEEEGLVHGGKKLRAVSPFLKEVDAKECGTKSVGPDLAVSCLLGPALGPTLPEAYRGTMLRCPLNFAGTLDPLKGQATLPFSPLVIPAFPAHLLATAAPSPMAAGLMHFPPASFDSALRHRLCPASSAWHVPPATTYAVPHFSFHLNTKL*