Sequence details bmy_06917 (Coding sequence)

Part of scaffold_266 (Scaffold)

For more information consult the page for scaffold_266 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

KHSRP ENSTTRG00000010390 (Bottlenosed dolphin)

Gene Details

KH-type splicing regulatory protein

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000009850, Bottlenosed dolphin)

Protein Percentage 94.11%
cDNA percentage 92.76%
Ka/Ks Ratio 0.07739 (Ka = 0.006, Ks = 0.0776)

KHSRP ENSBTAG00000021018 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000027991, Cow)

Protein Percentage 99.69%
cDNA percentage 93.39%
Ka/Ks Ratio 0.00519 (Ka = 0.0015, Ks = 0.2875)

Additional orthologs identified in other species via the OPTIC pipeline.

KHSRP (Human)   Khsrp (Mouse)  

Genome Location

Sequence Coding sequence

Length: 2067 bp    Location:133328..140901   Strand:+
Raw sequence 
>bmy_06917
ATCGCAGCCAAAATTGGAGGTGATGCCGCTACAACAGTGAATAACAGCACTCCTGATTTTGGTTTTGGAGGCCAAAAGAGGCAGTTAGAAGATGGAGACCAACCGGAGAGCAAGAAACTGGCTTCCCAGGGAGACTCCATCAGTTCTCAGCTCGGACCCATCCATCCTCCCCCCAGGACTTCAATGACAGAAGAGTACAGGGTCCCAGACGGCATGGTGGGACTAAACAGCGGTGGCCTACCCGAGCGCAGTGTGTCCTTGACAGGAGCCCCGGAGTCTGTGCAGAAAGCAAAGATGATGCTGGATGACATCGTGTCTCGGGGTCGTGGGGGCCCCCCAGGACAGTTCCACGACAACGCCAATGGGGGCCAGAATGGCACGGTGCAGGAGATCATGATCCCCGCAGGGAAGGCCGGCCTGGTCATCGGCAAAGGTGGAGAGACGATTAAGCAGCTGCAGGAACGGGCWGGAGTGAAGATGATTTTAATCCAAGATGGATCCCAGAACACGAACGTGGACAAACCGCTCCGGATCATCGGAGACCCTTACAAAGTACAGCAAGCCTGCGAGATGGTGATGGACATCCTTCGGGAGCGTGACCAGGGTGGCTTTGGGGACCGGAATGAGTATGGATCCCGGATCGGCGGGGGCATTGATGTGAGTGCAGGCTTCCCCAGGTGGATGGAGTGCCAGGATAGGCGGGGCGGGGGTGGGGGGCGGGGGGGCTGGCCAGCGGGCAGCAGAGGGCCGCAGGCTGGGGACAGAGCCCAGCTGACTCTCCTGCGTCCCGCCCGCCCTCAGGTGCCAGTGCCTAGGCATTCTGTGGGGGTGGTCATCGGCCGGAGCGGAGAGATGATTAAGAAGATCCAGAATGACGCGGGTGTTCGGATACAGTTTAAACAAGATGATGGGACGGGTCCCGAGAAGATAGCTCACATAATGGGGCCCCCAGACCGGTGTGAGCACGCCGCGAGGATCATCAATGATCTCCTCCAGAGCCTCAGGAGTGGTCCCCCGGGCCCTCCAGGGGGTCCTGGCATGCCCCCAGGGGGCCGAGGTCGAGGAAGAGGCCAAGGCAACTGGGGCCCTCCCGGTGGGGAGATGACCTTCTCCATTCCCACTCACAAGTGCGGGCTGGTCATCGGCCGAGGTGGCGAGAACGTGAAAGCCATAAACCAGCAGACGGGCGCCTTTGTAGAGATCTCCCGGCAGCTGCCACCCAACGGGGACCCCAACTTCAAATTGTTCATCATCCGGGGCTCGCCCCAGCAGATCGACCACGCCAAGCAGCTCATCGAGGAGAAGATCGAGGGTCCCCTCTGCCCAGTGGGACCAGGCCCTGGGGGCCCAGGCCCTGCCGGCCCCATGGGACCCTTCAACCCCGGGCCCTTCAATCAGGGGCCACCCGGGGCTCCCCCTCATGCTGGAGGCCCCCCTCCTCACCAGTACCCACCCCAGGGCTGGGGCAATACCTACCCTCAGTGGCAGCCGCCTGCTCCTCACGACCCGAATAAAGCCGCGGCTGCCGCCGCAGACCCCAACGCCGCCTGGGCCGCCTACTACTCACACTACTACCAGCAGCCCCCAGGCCCCGTGCCAGGCCCAGCACCGGCCCCCGCGGCCCCGCCCACCCAGGGCGAGCCCCCTCAGCCTCCACCTGCCGGCCAGTCGGACTACACTAAGGCCTGGGAGGAGTACTACAAGAAGATCGGCCAGCAGCCCCAGCAGCCCGGCGCGCCCCCGCAGCAGGACTACACGAAGGCCTGGGAGGAGTACTATAAGAAGCAGGCTCAAGTGGCCACGGGAGGGGGTCCGGGAGCACCCCCAGGCTCCCAGCCGGACTACAGTGCCGCCTGGGCCGAATATTACAGACAGCAAGCCGCTTACTACGGACAGACTCCAGGTCCTGGCGGCCCCCAGCCTCCACCCACACAGCAGGGACAGCAGCAGGCAAGTGGGAATTGCCACCCTCCTCCTCCTCCTTTCTCCTTCCAACCCCCGGCTACCGTCCATCCTGCCTTAGTGGGTAGCGCCGGAAATCCCTTCCCCTGCGGGGTGTGTCCTTGA

Related Sequences

bmy_06917T0 Protein

Length: 689 aa      View alignments
>bmy_06917T0
IAAKIGGDAATTVNNSTPDFGFGGQKRQLEDGDQPESKKLASQGDSISSQLGPIHPPPRTSMTEEYRVPDGMVGLNSGGLPERSVSLTGAPESVQKAKMMLDDIVSRGRGGPPGQFHDNANGGQNGTVQEIMIPAGKAGLVIGKGGETIKQLQERAGVKMILIQDGSQNTNVDKPLRIIGDPYKVQQACEMVMDILRERDQGGFGDRNEYGSRIGGGIDVSAGFPRWMECQDRRGGGGGRGGWPAGSRGPQAGDRAQLTLLRPARPQVPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGPEKIAHIMGPPDRCEHAARIINDLLQSLRSGPPGPPGGPGMPPGGRGRGRGQGNWGPPGGEMTFSIPTHKCGLVIGRGGENVKAINQQTGAFVEISRQLPPNGDPNFKLFIIRGSPQQIDHAKQLIEEKIEGPLCPVGPGPGGPGPAGPMGPFNPGPFNQGPPGAPPHAGGPPPHQYPPQGWGNTYPQWQPPAPHDPNKAAAAAADPNAAWAAYYSHYYQQPPGPVPGPAPAPAAPPTQGEPPQPPPAGQSDYTKAWEEYYKKIGQQPQQPGAPPQQDYTKAWEEYYKKQAQVATGGGPGAPPGSQPDYSAAWAEYYRQQAAYYGQTPGPGGPQPPPTQQGQQQASGNCHPPPPPFSFQPPATVHPALVGSAGNPFPCGVCP*