Sequence details bmy_06920 (Coding sequence)

Part of scaffold_266 (Scaffold)

For more information consult the page for scaffold_266 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PSPN ENSTTRG00000010346 (Bottlenosed dolphin)

Gene Details

persephin

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000009810, Bottlenosed dolphin)

Protein Percentage 97.39%
cDNA percentage 97.39%
Ka/Ks Ratio 0.1262 (Ka = 0.0113, Ks = 0.0899)

PSPN ENSBTAG00000031794 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000027984, Cow)

Protein Percentage 85.9%
cDNA percentage 88.25%
Ka/Ks Ratio 0.13948 (Ka = 0.0709, Ks = 0.5082)

Additional orthologs identified in other species via the OPTIC pipeline.

PSPN (Human)   Pspn (Mouse)  

Genome Location

Sequence Coding sequence

Length: 546 bp    Location:172975..173520   Strand:+
Raw sequence 
>bmy_06920
ATGGCCACAGGACGAGTCCTGCTAGGCTCTCTGCTGCTCCTGATCCTGCACTTGGACCTCCGCGGGGGCCCTGGGGCCTGGGGGGCTTCGGTGGCAGAGGAGGAGCTCTTGTCTGAGCCAGTGGTGGACAGAGGGATCCGGAGGCCACAGCTGGGTAAGGACCCCCAGAACCCCGTGCGCTCCCCGACTCCTGCCCGCCCAGACCCTGCCCGCTCTCAGCTGCCCCTTGTCCCCGCAGGCGCCCGCCCGCGCCGAGCCCTGGCCGGCCCGTGCCAGCTGTGGAGCCTACCCTTGCCCGTGGCCGAGCTGGGCTTGGGCTACACGTCGGAGGAGACGGTCATCTTCCGCTACTGTGCCGGCAGCTGCCCCCGCGGCGCCCGCACCCAGCACGGCCTGACGCTGGCCCGGCTGCGGGGCCAGGGCCGAGCCCACGGTGGGCCCTGCTGCCGCCCCACCCGCTACGCCGATGTGGCCTTCCTCGACGACCGCCACCGCTGGCAGCGGCTGCCCCAGCTCTCGGCGGCAGCCTGCGGCTGCGGCGGCTGA

Related Sequences

bmy_06920T0 Protein

Length: 182 aa      View alignments
>bmy_06920T0
MATGRVLLGSLLLLILHLDLRGGPGAWGASVAEEELLSEPVVDRGIRRPQLGKDPQNPVRSPTPARPDPARSQLPLVPAGARPRRALAGPCQLWSLPLPVAELGLGYTSEETVIFRYCAGSCPRGARTQHGLTLARLRGQGRAHGGPCCRPTRYADVAFLDDRHRWQRLPQLSAAACGCGG*