Part of scaffold_266 (Scaffold)

For more information consult the page for scaffold_266 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CLPP ENSTTRG00000010335 (Bottlenosed dolphin)

Gene Details

ClpP caseinolytic peptidase, ATP-dependent, proteolytic subunit homolog (E. coli)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000009801, Bottlenosed dolphin)

Protein Percentage 95.13%
cDNA percentage 95.72%
Ka/Ks Ratio 0.16532 (Ka = 0.0259, Ks = 0.1566)

CLPP ENSBTAG00000014712 (Cow)

Gene Details

Putative ATP-dependent Clp protease proteolytic subunit, mitochondrial

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000019577, Cow)

Protein Percentage 93.3%
cDNA percentage 91.07%
Ka/Ks Ratio 0.05284 (Ka = 0.03, Ks = 0.568)

CLPP  (Minke Whale)

Gene Details

caseinolytic mitochondrial matrix peptidase proteolytic subunit

External Links

Gene match (Identifier: BACU002575, Minke Whale)

Protein Percentage 95.13%
cDNA percentage 96.17%
Ka/Ks Ratio 0.21932 (Ka = 0.0262, Ks = 0.1193)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 681 bp    Location:186225..181005   Strand:-
>bmy_06922
CACGGAGGGCCCCTGACCCTCACCCCCATCTTTCTCCTCCAGGGTCGCGGCGAGCGCGCCTATGACATCTACTCTCGGCTGCTGCGGGAGCGCATCGTGTGCGTCATGGGCCCGATCGACGACAGTGTCGCCAGTCTGGTCATCGCGCAGCTGCTGTTCCTACAGTCGGAGAGCAACAAGAAGCCCATCCACATGTATATCAACAGCCCCGGTGGCGTGGTGACCTCGGGCCTGGCCATCTACGACACGATGCAGTACATCCTGAACCCCATCTGCACGTGGTGCGTGGGCCAGGCGGCCAGCATGGGCTCCCTGCTTCTGGCCGCTGGCACCCCGGGCATGCGCCACTCGCTCCCCAACTCCCGCATCATGATCCATCAGCCCTCCGGGGGCGCCCGGGGCCAAGCCACAGACATCGCCATCCAGGCGGAGGAAATCATTAAACTCAAGAAGCAGCTCTACAGCATCTACGCCAAGCACACCAAACAGAGCCTGCAGGTGATCGAGTCAGCCATGGAGAGGGACCGCTACATGAGCCCCATGGAGGCCCAGGAGTTTGGCATCTTGGACAAGGTTCTGGTCCACCCTCCCCAGGATGGTGAGGACGAGCCTGAGCTGGTGCAGAAGGAGCCGGTGGCAGCGGCGGCAGCAGTGGCAGAACCTGCCCCAGCGAATGCCTGA

Related Sequences

bmy_06922T0 Protein

Length: 227 aa      View alignments
>bmy_06922T0
HGGPLTLTPIFLLQGRGERAYDIYSRLLRERIVCVMGPIDDSVASLVIAQLLFLQSESNKKPIHMYINSPGGVVTSGLAIYDTMQYILNPICTWCVGQAASMGSLLLAAGTPGMRHSLPNSRIMIHQPSGGARGQATDIAIQAEEIIKLKKQLYSIYAKHTKQSLQVIESAMERDRYMSPMEAQEFGILDKVLVHPPQDGEDEPELVQKEPVAAAAAVAEPAPANA*